RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	CYB5R1	Q9UHQ9	305 aa		10.46	□□□□□ -0.73
SREBF1-215	ENST00000487401	KCNG2	Q9UJ96	466 aa		10.46	□□□□□ -0.73
SREBF1-215	ENST00000487401	NUP50	Q9UKX7	468 aa		10.46	□□□□□ -0.73
SREBF1-215	ENST00000487401	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.46	□□□□□ -0.73
SREBF1-215	ENST00000487401	INSIG2	Q9Y5U4	225 aa		10.46	□□□□□ -0.73
SREBF1-215	ENST00000487401		F5H0A9	414 aa	Predicted RBP	10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	DCTN3	O75935	186 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	FSHB	P01225	129 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	WNT2	P09544	360 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	RPS2	P15880	293 aa	Known RBP	10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	GGT2	P36268	569 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	COMP	P49747	757 aa	Predicted RBP	10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	SEC61A1	P61619	476 aa	Known RBP	10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	DBP	Q10586	325 aa	Predicted RBP	10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	GK2	Q14410	553 aa	Predicted RBP	10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	KRTAP27-1	Q3LI81	207 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	RPL13AP3	Q6NVV1	102 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	BTNL3	Q6UXE8	466 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	PGAP1	Q75T13	922 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	LINC00471	Q8N535	108 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	OR11L1	Q8NGX0	322 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	OR2T4	Q8NH00	348 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	PLEKHA8	Q96JA3	519 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	TMEM165	Q9HC07	324 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	MIOX	Q9UGB7	285 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	LRCH1	Q9Y2L9	728 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401	CDH10	Q9Y6N8	788 aa		10.45	□□□□□ -0.74
SREBF1-215	ENST00000487401		A8MXK9	166 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	MLNR	O43193	412 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	CCNB2	O95067	398 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	HLA-DPB1	P04440	258 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	PYCR1	P32322	319 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	HMGA2	P52926	109 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	RAD23A	P54725	363 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	GNB2	P62879	340 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	UBA52	P62987	128 aa	Known RBP	10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	TAF13	Q15543	124 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	ZNF181	Q2M3W8	571 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	LRRN1	Q6UXK5	716 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	CYP2R1	Q6VVX0	501 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	NLRC3	Q7RTR2	1065 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	MRPL21	Q7Z2W9	205 aa	Known RBP	10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	NAA40	Q86UY6	237 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	KLB	Q86Z14	1044 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	SIGLECL1	Q8N7X8	197 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	ZDHHC22	Q8N966	263 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	CYB561A3	Q8NBI2	242 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	OR8B3	Q8NGG8	313 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	DVL3	Q92997	716 aa	Predicted RBP	10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	ERGIC1	Q969X5	290 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	ZMYND19	Q96E35	227 aa	Predicted RBP	10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	NEIL1	Q96FI4	390 aa	Predicted RBP	10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	OR8B2	Q96RD0	313 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	TMEM246	Q9BRR3	403 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	TRIM15	Q9C019	465 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	EGLN3	Q9H6Z9	239 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	ESM1	Q9NQ30	184 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	MRPL22	Q9NWU5	206 aa	Known RBP	10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	ZNF69	Q9UC07	566 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	NOP16	Q9Y3C1	178 aa	Known RBP	10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	PPIAL4A	Q9Y536	164 aa		10.44	□□□□□ -0.74
SREBF1-215	ENST00000487401	GGT3P	A6NGU5	568 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	TVP23A	A6NH52	213 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401		M0R135	149 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	GAST	P01350	101 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	CD80	P33681	288 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	PMEL	P40967	661 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	PRSS12	P56730	875 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	PAX8	Q06710	450 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	BAMBI	Q13145	260 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	OR8G1	Q15617	311 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	RASSF6	Q6ZTQ3	369 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	DOK3	Q7L591	496 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	PIGW	Q7Z7B1	504 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	CELF2-AS1	Q8N7Q2	184 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	OR9Q2	Q8NGE9	314 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	OR4C15	Q8NGM1	316 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	ZNF799	Q96GE5	643 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	MAP6	Q96JE9	813 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	PLA2G12A	Q9BZM1	189 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	SLC22A4	Q9H015	551 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	PNRC2	Q9NPJ4	139 aa	Known RBP	10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	TBC1D23	Q9NUY8	699 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	ACTR3B	Q9P1U1	418 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	LYVE1	Q9Y5Y7	322 aa		10.43	□□□□□ -0.74
SREBF1-215	ENST00000487401	IGHV2-70D	A0A0C4DH43	119 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401		A0A1B0GWJ7	208 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	CD300LB	A8K4G0	201 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401		B2RBV5	119 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	BHLHE40	O14503	412 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	FSTL3	O95633	263 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	CA6	P23280	308 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	FMO3	P31513	532 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	CD200	P41217	278 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	GATA4	P43694	442 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	MTNR1A	P48039	350 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	PITPNB	P48739	271 aa		10.42	□□□□□ -0.74
SREBF1-215	ENST00000487401	ZNF404	Q494X3	552 aa		10.42	□□□□□ -0.74

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