RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 OC90Q02509 493 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-208ENST00000487245 GK2Q14410 553 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-208ENST00000487245 EXT1Q16394 746 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 MOGAT2Q3SYC2 334 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 ZNF260Q3ZCT1 412 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 LY6G6FQ5SQ64 297 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 AGBL5Q8NDL9 886 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 NOXO1Q8NFA2 376 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 ZBTB8AQ96BR9 441 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 FBXL2Q9UKC9 423 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 LOC102725191A0A1B0GVB3 256 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 DISC1C4P0D8 188 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 M0QYG6 137 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 LMX1BO60663 402 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 TTRP02766 147 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 GSK3AP49840 483 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 ZNF529Q6P280 563 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 C11orf88Q6PI97 169 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 OPN5Q6U736 354 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 BPIFB2Q8N4F0 458 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 OR6X1Q8NH79 312 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 OR5B2Q96R09 309 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 ZNF700Q9H0M5 742 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 SDHAF2Q9NX18 166 aa23.18■■□□□ 1.3
HLA-C-208ENST00000487245 D6RAR5 112 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 NTN3O00634 580 aaPredicted RBP23.17■■□□□ 1.3
HLA-C-208ENST00000487245 ZP3P21754 424 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 QRFPP83859 136 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 RHOUQ7L0Q8 258 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 ZNF584Q8IVC4 421 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 OR13C8Q8NGS7 320 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 FAM46BQ96A09 425 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 AKIRIN1Q9H9L7 192 aaPredicted RBP23.17■■□□□ 1.3
HLA-C-208ENST00000487245 CHCHD2Q9Y6H1 151 aaPredicted RBP23.17■■□□□ 1.3
HLA-C-208ENST00000487245 RALGAPA1Q6GYQ0 2036 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 LOC101059948A0A1B0GTJ6 334 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 RAB27BO00194 218 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 PGA4P0DJD7 388 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 PGA3P0DJD8 388 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 POU3F2P20265 443 aaPredicted RBP23.17■■□□□ 1.3
HLA-C-208ENST00000487245 CORO6Q6QEF8 472 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 SLC22A24Q8N4F4 322 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 WDSUB1Q8N9V3 476 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 OR1M1Q8NGA1 313 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 FGGYQ96C11 551 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 PRRT1Q99946 306 aa23.17■■□□□ 1.3
HLA-C-208ENST00000487245 OR14I1A6ND48 311 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 C9J4A7 227 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 MPGP29372 298 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 AGTR1P30556 359 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 SLC35A1P78382 337 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 FGL1Q08830 312 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 SLC25A47Q6Q0C1 308 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 SLC51BQ86UW2 128 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 OR5M8Q8NGP6 311 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 OR2AJ1Q8NGZ0 328 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 MAFAQ8NHW3 353 aaPredicted RBP23.16■■□□□ 1.3
HLA-C-208ENST00000487245 M1APQ8TC57 530 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 SLC6A7Q99884 636 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 CNTD2Q9H8S5 307 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 MOB1AQ9H8S9 216 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 KCNMB2Q9Y691 235 aa23.16■■□□□ 1.3
HLA-C-208ENST00000487245 IGHV1-45A0A0A0MS14 117 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 TRAV14DV4A0A0A6YYC5 116 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 WIPF3A6NGB9 483 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 EIF1AYO14602 144 aaKnown RBP23.15■■□□□ 1.3
HLA-C-208ENST00000487245 TRAF3IP2O43734 574 aaPredicted RBP23.15■■□□□ 1.3
HLA-C-208ENST00000487245 CER1O95813 267 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 HLA-GP17693 338 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 SORDQ00796 357 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 OR10K2Q6IF99 312 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 PAQR4Q8N4S7 273 aaPredicted RBP23.15■■□□□ 1.3
HLA-C-208ENST00000487245 STEAP2Q8NFT2 490 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 MR1Q95460 341 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 PBOV1Q9GZY1 135 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 MFFQ9GZY8 342 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 LOC105371267A0A1B0GV96 52 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 TMEM235A6NFC5 223 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 LAMTOR5O43504 91 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 FCER2P06734 321 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 MC2RQ01718 297 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 ZDHHC22Q8N966 263 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 OR10S1Q8NGN2 331 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 CCDC120Q96HB5 630 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 IMMP1LQ96LU5 166 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 RYDENQ9NUL5 291 aaKnown RBP23.15■■□□□ 1.3
HLA-C-208ENST00000487245 SLC5A6Q9Y289 635 aa23.15■■□□□ 1.3
HLA-C-208ENST00000487245 A0A1W2PNR3 127 aa23.14■■□□□ 1.29
HLA-C-208ENST00000487245 TLX3O43711 291 aaPredicted RBP23.14■■□□□ 1.29
HLA-C-208ENST00000487245 ZNF28P17035 718 aa23.14■■□□□ 1.29
HLA-C-208ENST00000487245 ZNF43P17038 809 aa23.14■■□□□ 1.29
HLA-C-208ENST00000487245 ZFP36L1Q07352 338 aaKnown RBP23.14■■□□□ 1.29
HLA-C-208ENST00000487245 INPP5JQ15735 1006 aaPredicted RBP23.14■■□□□ 1.29
HLA-C-208ENST00000487245 KCNMB1Q16558 191 aa23.14■■□□□ 1.29
HLA-C-208ENST00000487245 ZNF660Q6AZW8 331 aaPredicted RBP23.14■■□□□ 1.29
HLA-C-208ENST00000487245 SLC25A42Q86VD7 318 aa23.14■■□□□ 1.29
HLA-C-208ENST00000487245 FJX1Q86VR8 437 aa23.14■■□□□ 1.29
HLA-C-208ENST00000487245 SESN1Q9Y6P5 492 aa23.14■■□□□ 1.29
HLA-C-208ENST00000487245 AQP7P3A6NL99 342 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 ZNF726A6NNF4 738 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms