RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SAR1AQ9NR31 198 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 LHFPL6Q9Y693 200 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 IGHV4-59P01825 116 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 LIPFP07098 398 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 CD200P41217 278 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 MPPED2Q15777 294 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 MEP1BQ16820 701 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 RSPO1Q2MKA7 263 aaPredicted RBP16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 CD276Q5ZPR3 534 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 COLCA1Q6ZS62 124 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 GJC3Q8NFK1 279 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 OR2T12Q8NG77 320 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 WDFY2Q96P53 400 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 NDEL1Q9GZM8 345 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 NUAK2Q9H093 628 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 NRIP3Q9NQ35 241 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 UFSP2Q9NUQ7 469 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 ERVK-18Q9QC07 812 aa16.11■□□□□ 0.17
SMPDL3A-202ENST00000487215 DOCK11Q5JSL3 2073 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 IGHV1-69DA0A0B4J2H0 117 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 LOC100653049A0A140TA62 436 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 SLC22A2O15244 555 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 KRT34O76011 436 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 NDUFB2O95178 105 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 IGHV1-69P01742 117 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 GK2Q14410 553 aaPredicted RBP16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 GPR139Q6DWJ6 353 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 CORO6Q6QEF8 472 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 PTCHD4Q6ZW05 846 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 ARPINQ7Z6K5 226 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 GPX7Q96SL4 187 aaPredicted RBP16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 TRIM15Q9C019 465 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 SMURF1Q9HCE7 757 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 TCF7L1Q9HCS4 588 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 RPS6KA6Q9UK32 745 aa16.1■□□□□ 0.17
SMPDL3A-202ENST00000487215 A0A0U1RQK1 487 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 ELOVL7A1L3X0 281 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 SOCS2O14508 198 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 KRTAP27-1Q3LI81 207 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 METTL11BQ5VVY1 283 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 SFRP4Q6FHJ7 346 aaPredicted RBP16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 ADCK1Q86TW2 530 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 LDLRAD3Q86YD5 345 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 LHX4Q969G2 390 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 FAM46AQ96IP4 442 aaKnown RBP16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 TSSK2Q96PF2 358 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 SIRPDQ9H106 197 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 FGFR1OP2Q9NVK5 253 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 SIGLEC7Q9Y286 467 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 TMEM5Q9Y2B1 443 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 CAPN7Q9Y6W3 813 aa16.09■□□□□ 0.17
SMPDL3A-202ENST00000487215 LGALS8O00214 317 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 DCTN6O00399 190 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 ADAM20O43506 726 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 PTP4A3O75365 173 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 ACSM4P0C7M7 580 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 CDKN2AP42771 156 aaKnown RBP16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 IER3P46695 156 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 CENPAP49450 140 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 COX10Q12887 443 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 KCNJ8Q15842 424 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 PGM2L1Q6PCE3 622 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 RRM2BQ7LG56 351 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 PNLDC1Q8NA58 520 aaKnown RBP16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 GMPR2Q9P2T1 348 aaKnown RBP16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 RNF7Q9UBF6 113 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 IER3IP1Q9Y5U9 82 aa16.08■□□□□ 0.16
SMPDL3A-202ENST00000487215 C3orf80F5H4A9 247 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 ZNF682O95780 498 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 FXYD6P3P58550 94 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 IFI44LQ53G44 452 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 CFAP77Q6ZQR2 320 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 Q6ZSV7 163 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 BOLLQ8N9W6 283 aaKnown RBP16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 ZSCAN4Q8NAM6 433 aaPredicted RBP16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 SCCPDHQ8NBX0 429 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 FAM110DQ8TAY7 271 aaPredicted RBP16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 SLC7A13Q8TCU3 470 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 SLCO4A1Q96BD0 722 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 RASSF4Q9H2L5 321 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 FN3KRPQ9HA64 309 aa16.07■□□□□ 0.16
SMPDL3A-202ENST00000487215 IGLV1-36A0A0B4J1U3 117 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 F5H5K5 113 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 FCN3O75636 299 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 TXNDC12O95881 172 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 ARF6P62330 175 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 MALLQ13021 153 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 OR8G1Q15617 311 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 OR8B8Q15620 311 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 SLC18B1Q6NT16 456 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 DNM1P34Q6PK57 102 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 PGAP1Q75T13 922 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 NAA40Q86UY6 237 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 LINC00346Q8IVM7 164 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 RP9Q8TA86 221 aaKnown RBP16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 SPRYD4Q8WW59 207 aaPredicted RBP16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 RSRC1Q96IZ7 334 aaKnown RBP16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 ANKRD19PQ9H560 264 aa16.06■□□□□ 0.16
SMPDL3A-202ENST00000487215 NDUFAB1O14561 156 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms