RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CYP2R1Q6VVX0 501 aa20.57■□□□□ 0.88
LIME1-206ENST00000487026 CYB561A3Q8NBI2 242 aa20.57■□□□□ 0.88
LIME1-206ENST00000487026 OR9Q2Q8NGE9 314 aa20.57■□□□□ 0.88
LIME1-206ENST00000487026 ZNRF4Q8WWF5 429 aa20.57■□□□□ 0.88
LIME1-206ENST00000487026 MAP6Q96JE9 813 aa20.57■□□□□ 0.88
LIME1-206ENST00000487026 OR5V1Q9UGF6 321 aa20.57■□□□□ 0.88
LIME1-206ENST00000487026 TVP23AA6NH52 213 aa20.56■□□□□ 0.88
LIME1-206ENST00000487026 RPS2P15880 293 aaKnown RBP20.56■□□□□ 0.88
LIME1-206ENST00000487026 CD80P33681 288 aa20.56■□□□□ 0.88
LIME1-206ENST00000487026 MXRA7P84157 204 aa20.56■□□□□ 0.88
LIME1-206ENST00000487026 KLBQ86Z14 1044 aa20.56■□□□□ 0.88
LIME1-206ENST00000487026 DUX5Q96PT3 197 aa20.56■□□□□ 0.88
LIME1-206ENST00000487026 TMEM246Q9BRR3 403 aa20.56■□□□□ 0.88
LIME1-206ENST00000487026 MRI1Q9BV20 369 aa20.56■□□□□ 0.88
LIME1-206ENST00000487026 NTN4Q9HB63 628 aa20.56■□□□□ 0.88
LIME1-206ENST00000487026 DDX28Q9NUL7 540 aaKnown RBP20.56■□□□□ 0.88
LIME1-206ENST00000487026 IGHV3OR16-10A0A075B7F0 116 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 ZNF823P16415 610 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 PAX8Q06710 450 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 PPP1R8Q12972 351 aaKnown RBP20.55■□□□□ 0.88
LIME1-206ENST00000487026 MAB21L1Q13394 359 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 LYPD4Q6UWN0 246 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 C16orf89Q6UX73 402 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 OR51L1Q8NGJ5 315 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 OR10S1Q8NGN2 331 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 DDOQ99489 341 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 BTBD10Q9BSF8 475 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 SSBP3Q9BWW4 388 aaPredicted RBP20.55■□□□□ 0.88
LIME1-206ENST00000487026 LRCH1Q9Y2L9 728 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 ARL2BPQ9Y2Y0 163 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 LYVE1Q9Y5Y7 322 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 CDH10Q9Y6N8 788 aa20.55■□□□□ 0.88
LIME1-206ENST00000487026 A0A1B0GWJ7 208 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 LRRC30A6NM36 301 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 TNFRSF11BO00300 401 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 GASTP01350 101 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 ANOS1P23352 680 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 TPTEP56180 551 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 GNGT1P63211 74 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 PAX2Q02962 417 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 MALLQ13021 153 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 RBMS3Q6XE24 437 aaKnown RBP20.54■□□□□ 0.88
LIME1-206ENST00000487026 PGAP1Q75T13 922 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 PIGWQ7Z7B1 504 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 C19orf18Q8NEA5 215 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 PROKR2Q8NFJ6 384 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 MIOXQ9UGB7 285 aa20.54■□□□□ 0.88
LIME1-206ENST00000487026 SOX21Q9Y651 276 aaPredicted RBP20.54■□□□□ 0.88
LIME1-206ENST00000487026 BHLHE40O14503 412 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 KRT36O76013 467 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 PSKH1P11801 424 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 ATP6V1B2P21281 511 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 HMGA2P52926 109 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 GNB2P62879 340 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 HOXA4Q00056 320 aaPredicted RBP20.53■□□□□ 0.88
LIME1-206ENST00000487026 ZNF181Q2M3W8 571 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 TUSC1Q2TAM9 212 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 ZNF362Q5T0B9 420 aaPredicted RBP20.53■□□□□ 0.88
LIME1-206ENST00000487026 PRAMEF6Q5VXH4 476 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 LYPD2Q6UXB3 125 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 OR52L1Q8NGH7 329 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 OR8D4Q8NGM9 314 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 SPRYD4Q8WW59 207 aaPredicted RBP20.53■□□□□ 0.88
LIME1-206ENST00000487026 ZNF48Q96MX3 618 aaPredicted RBP20.53■□□□□ 0.88
LIME1-206ENST00000487026 UFSP2Q9NUQ7 469 aa20.53■□□□□ 0.88
LIME1-206ENST00000487026 C5orf63A6NC05 138 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 M0R135 149 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 CA6P23280 308 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 SNAI3Q3KNW1 292 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 ZNF404Q494X3 552 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 AWAT1Q58HT5 328 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 DOK3Q7L591 496 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 OR9Q1Q8NGQ5 310 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 SPTSSAQ969W0 71 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 NEIL1Q96FI4 390 aaPredicted RBP20.52■□□□□ 0.88
LIME1-206ENST00000487026 ZNF799Q96GE5 643 aa20.52■□□□□ 0.88
LIME1-206ENST00000487026 FAM20BO75063 409 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 IGHV4-38-2P0DP08 117 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 GATA4P43694 442 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 MPPED2Q15777 294 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 ZNF770Q6IQ21 691 aaPredicted RBP20.51■□□□□ 0.87
LIME1-206ENST00000487026 MRPL21Q7Z2W9 205 aaKnown RBP20.51■□□□□ 0.87
LIME1-206ENST00000487026 C1orf87Q8N0U7 546 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 SLC37A3Q8NCC5 494 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 OR4C15Q8NGM1 316 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 OR2AE1Q8NHA4 323 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 RAB40AQ8WXH6 277 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 C1orf147Q96MC9 270 aaPredicted RBP20.51■□□□□ 0.87
LIME1-206ENST00000487026 NDE1Q9NXR1 346 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 IL20Q9NYY1 176 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 KCNG2Q9UJ96 466 aa20.51■□□□□ 0.87
LIME1-206ENST00000487026 IGHV2-70DA0A0C4DH43 119 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 DNAJC9-AS1A6NH13 148 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 DCTN3O75935 186 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 CCNB2O95067 398 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 IRF2P14316 349 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 CD200P41217 278 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 ZNF92Q03936 586 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 BAMBIQ13145 260 aa20.5■□□□□ 0.87
LIME1-206ENST00000487026 OR8G1Q15617 311 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms