RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TSPAN14Q8NG11 270 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 OR1J2Q8NGS2 313 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 OR52N1Q8NH53 320 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 FAM222BQ8WU58 562 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 RORBQ92753 470 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 SPTSSAQ969W0 71 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 PELI1Q96FA3 418 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 PLPPR2Q96GM1 343 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 MOV10Q9HCE1 1003 aaKnown RBP11.04□□□□□ -0.64
HDAC6-229ENST00000486665 BABAM2Q9NXR7 383 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF319Q9P2F9 582 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 ATPIF1Q9UII2 106 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 ERGIC3Q9Y282 383 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 LSM2Q9Y333 95 aaKnown RBP11.04□□□□□ -0.64
HDAC6-229ENST00000486665 GRIP1Q9Y3R0 1128 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 N6AMT1Q9Y5N5 214 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 SNX5Q9Y5X3 404 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-229ENST00000486665 M0R135 149 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 CASKO14936 926 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 NGFP01138 241 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 MT-ND5P03915 603 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 LCKP06239 509 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 TACSTD2P09758 323 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 SMIM18P0DKX4 95 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 PCMT1P22061 227 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 PTAFRP25105 342 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 DCTDP32321 178 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 PEX19P40855 299 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 GTF2A1P52655 376 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF121P58317 390 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-229ENST00000486665 ACTA2P62736 377 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 ACTG2P63267 376 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 TMEM108Q6UXF1 575 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 IL17RDQ8NFM7 739 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 MRPL48Q96GC5 212 aaKnown RBP11.03□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF799Q96GE5 643 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 C4orf45Q96LM5 186 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 DCLRE1CQ96SD1 692 aaKnown RBP11.03□□□□□ -0.64
HDAC6-229ENST00000486665 POFUT1Q9H488 388 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 NIPAL2Q9H841 368 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 CDH20Q9HBT6 801 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 NGBQ9NPG2 151 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 BRD7Q9NPI1 651 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 ACOT13Q9NPJ3 140 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 FAM206AQ9NX38 181 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 SIRT4Q9Y6E7 314 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-229ENST00000486665 R4GMQ9 66 aa11.03□□□□□ -0.64
HDAC6-229ENST00000486665 ANKHD1Q8IWZ3 2542 aaKnown RBP11.03□□□□□ -0.64
HDAC6-229ENST00000486665 FLNAP21333 2647 aaKnown RBP11.02□□□□□ -0.65
HDAC6-229ENST00000486665 A0A087WXM4 84 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 TMEM269A0A1B0GVZ9 245 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 TRIM64CA6NLI5 447 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 MYL12BO14950 172 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 PLAUP00749 431 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 LCATP04180 440 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 ANXA2P07355 339 aaKnown RBP11.02□□□□□ -0.65
HDAC6-229ENST00000486665 GBX2P52951 348 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-229ENST00000486665 WNT4P56705 351 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 NANOS3P60323 173 aaKnown RBP11.02□□□□□ -0.65
HDAC6-229ENST00000486665 PSMA6P60900 246 aaKnown RBP11.02□□□□□ -0.65
HDAC6-229ENST00000486665 DAZAP2Q15038 168 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-229ENST00000486665 SNAI3Q3KNW1 292 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 KRTAP21-3Q3LHN1 58 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 BEX5Q5H9J7 111 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 XAF1Q6GPH4 301 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 DRAM2Q6UX65 266 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 COLCA1Q6ZS62 124 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 KCTD8Q6ZWB6 473 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 FAM57BQ71RH2 274 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 FAM220AQ7Z4H9 259 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 TMEM200AQ86VY9 491 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 EGFL6Q8IUX8 553 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 ZNF101Q8IZC7 436 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 PRSS35Q8N3Z0 413 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 HS3ST6Q96QI5 342 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 MYCBPQ99417 103 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-229ENST00000486665 DOK1Q99704 481 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 MND1Q9BWT6 205 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 C1QTNF5Q9BXJ0 243 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 OR51B6Q9H340 312 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 LIME1Q9H400 295 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 G6PC2Q9NQR9 355 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 OR52A1Q9UKL2 312 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 SLC22A13Q9Y226 551 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 STARD10Q9Y365 291 aa11.02□□□□□ -0.65
HDAC6-229ENST00000486665 MAGEA13PA6NCF6 341 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 ATP6V1G2-DDX39BF2Z307 99 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 ABCD4O14678 606 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 CRYAAP02489 173 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 FAM157BP0CG42 384 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 ATP6V1B1P15313 513 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 HOXB4P17483 251 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-229ENST00000486665 KIR3DL2P43630 455 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 SLC6A9P48067 706 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 MMP16P51512 607 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 UCP2P55851 309 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 SPHARQ15513 63 aa11.01□□□□□ -0.65
HDAC6-229ENST00000486665 MED22Q15528 200 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms