RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 LMX1BO60663 402 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 GPR75O95800 540 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 TXNDC12O95881 172 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 HLA-DQA2P01906 255 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 SLC35G6P0C7Q6 338 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 TBC1D3HP0C7X1 549 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 THBS4P35443 961 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 RPS15AP62244 130 aaKnown RBP9.51□□□□□ -0.89
CCDC171-208ENST00000486641 RAP1AP62834 184 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 SUPT4H1P63272 117 aaKnown RBP9.51□□□□□ -0.89
CCDC171-208ENST00000486641 C1orf100Q5SVJ3 147 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 TMEM184AQ6ZMB5 413 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 SPNS3Q6ZMD2 512 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF679Q8IYX0 411 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 SLC39A11Q8N1S5 342 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 SEMA6DQ8NFY4 1073 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 OR2I1PQ8NGU4 316 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 OR4K15Q8NH41 348 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 ST7LQ8TDW4 575 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 MAFIPQ8WZ33 124 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 FAM46BQ96A09 425 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 PTX4Q96A99 478 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 SSX3Q99909 188 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 SMIM3Q9BZL3 60 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 TGIF2Q9GZN2 237 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 RAB22AQ9UL26 194 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 MRPS2Q9Y399 296 aaKnown RBP9.51□□□□□ -0.89
CCDC171-208ENST00000486641 HDGFL3Q9Y3E1 203 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 RHBDD3Q9Y3P4 386 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 TMEM184BQ9Y519 407 aaPredicted RBP9.51□□□□□ -0.89
CCDC171-208ENST00000486641 A0A087X0M5 115 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 A0A1B0GX30 115 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 PRRT4C9JH25 899 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 RENP00797 406 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 CSTAP01040 98 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 C8AP07357 584 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 OR13C7P0DN81 318 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 FSTP19883 344 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 P2RY2P41231 377 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 RABIFP47224 123 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 DNASE1L1P49184 302 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 UCP2P55851 309 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 SPCS3P61009 180 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 LSM6P62312 80 aaKnown RBP9.51□□□□□ -0.89
CCDC171-208ENST00000486641 RPL18Q07020 188 aaKnown RBP9.51□□□□□ -0.89
CCDC171-208ENST00000486641 UNC119Q13432 240 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 RSU1Q15404 277 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 TOMM34Q15785 309 aaPredicted RBP9.51□□□□□ -0.89
CCDC171-208ENST00000486641 KIF26BQ2KJY2 2108 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 GFI1BQ5VTD9 330 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 HIST2H3AQ71DI3 136 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 LYPD6Q86Y78 171 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 OR5T3Q8NGG3 340 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 CTHRC1Q96CG8 243 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 MISP3Q96FF7 219 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 LPAR4Q99677 370 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 FBXL17Q9UF56 701 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 ZDHHC8Q9ULC8 765 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 DNAH14Q0VDD8 3507 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 A0A1W2PQ45 241 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-208ENST00000486641 A0A1W2PQY0 241 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 MEGF11A6BM72 1044 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 BTBD17A6NE02 478 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF264O43296 627 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 JTBO76095 146 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 F10P00742 488 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 TIMP1P01033 207 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 PET100P0DJ07 73 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 RPL12P30050 165 aaKnown RBP9.5□□□□□ -0.89
CCDC171-208ENST00000486641 FHITP49789 147 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 ADPRHP54922 357 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 PKIAP61925 76 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 RAB1AP62820 205 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 FAM3AP98173 230 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF616Q08AN1 781 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF141Q15928 474 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 PTCRAQ6ISU1 281 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-208ENST00000486641 CATSPERDQ86XM0 798 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 C19orf47Q8N9M1 422 aaKnown RBP9.5□□□□□ -0.89
CCDC171-208ENST00000486641 OR13C3Q8NGS6 347 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 OR4C3Q8NH37 302 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 TM4SF19Q96DZ7 209 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 TCTN2Q96GX1 697 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 RTBDNQ9BSG5 229 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-208ENST00000486641 CNTD2Q9H8S5 307 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 GDE1Q9NZC3 331 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 LRIT1Q9P2V4 623 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 MMP24Q9Y5R2 645 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 XIRP2A4UGR9 3374 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 LOC390937A0A1W2PQ73 354 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF354AO60765 605 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-208ENST00000486641 SFTPBP07988 381 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 ASAH2BP0C7U1 165 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF708P17019 499 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 FCGR2CP31995 323 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 TMEM33P57088 247 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 ENPP2Q13822 863 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 PDZD11Q5EBL8 140 aa9.5□□□□□ -0.89
CCDC171-208ENST00000486641 CLEC9AQ6UXN8 241 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms