RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 NSMCE2Q96MF7 247 aa18.79■□□□□ 0.6
SREBF1-214ENST00000486311 PITX2Q99697 317 aa18.79■□□□□ 0.6
SREBF1-214ENST00000486311 PNRC2Q9NPJ4 139 aaKnown RBP18.79■□□□□ 0.6
SREBF1-214ENST00000486311 TMEM100Q9NV29 134 aa18.79■□□□□ 0.6
SREBF1-214ENST00000486311 PPIAL4AQ9Y536 164 aa18.79■□□□□ 0.6
SREBF1-214ENST00000486311 LRRC30A6NM36 301 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 F5H5K5 113 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 F5H5P2 479 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 ZNF205O95201 554 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 FABP3P05413 133 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 NOS3P29474 1203 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 RRM2P31350 389 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 PAX2Q02962 417 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 GK2Q14410 553 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-214ENST00000486311 AWAT1Q58HT5 328 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 ZNF620Q6ZNG0 422 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 MOGAT3Q86VF5 341 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 KLBQ86Z14 1044 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 SDR9C7Q8NEX9 313 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 OR2AJ1Q8NGZ0 328 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 ATF6BQ99941 703 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 CDADC1Q9BWV3 514 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 SSBP3Q9BWW4 388 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-214ENST00000486311 IL1RAPQ9NPH3 570 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 MIOXQ9UGB7 285 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 TMCC3Q9ULS5 477 aa18.78■□□□□ 0.6
SREBF1-214ENST00000486311 IGHV3-64DA0A0J9YX35 117 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 ARPC2O15144 300 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 RPS2P15880 293 aaKnown RBP18.77■□□□□ 0.6
SREBF1-214ENST00000486311 CD80P33681 288 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 MSX2P35548 267 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-214ENST00000486311 PMELP40967 661 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 GATA4P43694 442 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 TRAP1Q12931 704 aaKnown RBP18.77■□□□□ 0.6
SREBF1-214ENST00000486311 TSPAN31Q12999 210 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 DEFB107AQ8IZN7 70 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 ARHGAP24Q8N264 748 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 GNPDA2Q8TDQ7 276 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 TMEM246Q9BRR3 403 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 BTBD10Q9BSF8 475 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 FN3KQ9H479 309 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 TAS2R1Q9NYW7 299 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 KCNG2Q9UJ96 466 aa18.77■□□□□ 0.6
SREBF1-214ENST00000486311 HLA-DQA2P01906 255 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 PPIAL4GP0DN37 164 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 PRTN3P24158 256 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 ZNF404Q494X3 552 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 SPATS1Q496A3 300 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 PGBD2Q6P3X8 592 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 NAA40Q86UY6 237 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 C1orf87Q8N0U7 546 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 BCL6BQ8N143 479 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-214ENST00000486311 CELF2-AS1Q8N7Q2 184 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 OR52E2Q8NGJ4 325 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 SGMS2Q8NHU3 365 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 NEIL1Q96FI4 390 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-214ENST00000486311 CDRT15Q96T59 188 aa18.76■□□□□ 0.59
SREBF1-214ENST00000486311 ZMAT3Q9HA38 289 aaKnown RBP18.76■□□□□ 0.59
SREBF1-214ENST00000486311 MRPL22Q9NWU5 206 aaKnown RBP18.76■□□□□ 0.59
SREBF1-214ENST00000486311 PRPF19Q9UMS4 504 aaKnown RBP18.76■□□□□ 0.59
SREBF1-214ENST00000486311 LCATP04180 440 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 HLA-DPB1P04440 258 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 HKR1P10072 659 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 EGR1P18146 543 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 PRSS12P56730 875 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.75■□□□□ 0.59
SREBF1-214ENST00000486311 MALLQ13021 153 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 MAB21L1Q13394 359 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 SLC35F1Q5T1Q4 408 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 BTNL3Q6UXE8 466 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 LRRN1Q6UXK5 716 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 Q8TCH9 128 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 ERGIC1Q969X5 290 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 DACT3Q96B18 629 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-214ENST00000486311 SLC7A6OSQ96CW6 309 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-214ENST00000486311 PLEKHA8Q96JA3 519 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 MAP6Q96JE9 813 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 ZNF48Q96MX3 618 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-214ENST00000486311 CDH10Q9Y6N8 788 aa18.75■□□□□ 0.59
SREBF1-214ENST00000486311 MGAM2Q2M2H8 2515 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 IGHV2-70DA0A0C4DH43 119 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 DNAJC9-AS1A6NH13 148 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 CD200P41217 278 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 TPTEP56180 551 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 GNB2P62879 340 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 CLEC12AQ5QGZ9 265 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 FAM201AQ5SY85 155 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 PGAP1Q75T13 922 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 ZDHHC21Q8IVQ6 265 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 RAB40AQ8WXH6 277 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 SLCO4A1Q96BD0 722 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 C1orf147Q96MC9 270 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-214ENST00000486311 DDOQ99489 341 aa18.74■□□□□ 0.59
SREBF1-214ENST00000486311 M0R135 149 aa18.73■□□□□ 0.59
SREBF1-214ENST00000486311 SPRY1O43609 319 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-214ENST00000486311 DNAJC8O75937 253 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-214ENST00000486311 KRT36O76013 467 aa18.73■□□□□ 0.59
SREBF1-214ENST00000486311 IRF2P14316 349 aa18.73■□□□□ 0.59
SREBF1-214ENST00000486311 ZNF823P16415 610 aa18.73■□□□□ 0.59
SREBF1-214ENST00000486311 HMGA2P52926 109 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms