RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 NR2C2APQ86WQ0 139 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 CXorf67Q86X51 503 aaPredicted RBP12.57□□□□□ -0.4
COL9A1-207ENST00000486080 OR51E1Q8TCB6 317 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 TSEN15Q8WW01 171 aaKnown RBP12.57□□□□□ -0.4
COL9A1-207ENST00000486080 SLC25A46Q96AG3 418 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 SOX7Q9BT81 388 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 SFXN3Q9BWM7 321 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 B3GNT2Q9NY97 397 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 CCDC59Q9P031 241 aaKnown RBP12.57□□□□□ -0.4
COL9A1-207ENST00000486080 Q9UFV3 132 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 PRR14LQ5THK1 2151 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 ZFYVE26Q68DK2 2539 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 LOC100509620A0A075B734 347 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 TRBV5-7A0A0A0MS05 114 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 A0A1B0GTI1 187 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 ISG15P05161 165 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 UBCP0CG48 685 aaKnown RBP12.56□□□□□ -0.4
COL9A1-207ENST00000486080 ARR3P36575 388 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 MTNR1BP49286 362 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 HNRNPA0Q13151 305 aaKnown RBP12.56□□□□□ -0.4
COL9A1-207ENST00000486080 HSD17B12Q53GQ0 312 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 ZNF474Q6S9Z5 364 aaPredicted RBP12.56□□□□□ -0.4
COL9A1-207ENST00000486080 TMEM106AQ96A25 262 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 PGAM5Q96HS1 289 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 MOB1AQ9H8S9 216 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 POLEQ07864 2286 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
COL9A1-207ENST00000486080 ARL6IP5O75915 188 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 CLPXO76031 633 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 UBL3O95164 117 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 CCL2P13500 99 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 BMP5P22003 454 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 ACHEP22303 614 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 MYL9P24844 172 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 RORCP51449 518 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 TPTEP56180 551 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 GFOD2Q3B7J2 385 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 SNAI3Q3KNW1 292 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 TMEM244Q5VVB8 128 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 TMEM53Q6P2H8 277 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 MYO7BQ6PIF6 2116 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 LUZP2Q86TE4 346 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 MDP1Q86V88 176 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 ZNF584Q8IVC4 421 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 ST6GALNAC3Q8NDV1 305 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 MCFD2Q8NI22 146 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 TBC1D15Q8TC07 691 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 ASB5Q8WWX0 329 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 DACH2Q96NX9 599 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 KCNS3Q9BQ31 491 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 HHLA2Q9UM44 414 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 IGSF10Q6WRI0 2623 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 TBX1O43435 398 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 SRMP19623 302 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 OR10A3P58181 314 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 GSG1Q2KHT4 349 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 DRAM2Q6UX65 266 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 BEND4Q6ZU67 534 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 OR13C3Q8NGS6 347 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 PHYHIPQ92561 330 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 GPR84Q9NQS5 396 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 DHDHQ9UQ10 334 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 KALRNO60229 2985 aa12.55□□□□□ -0.4
COL9A1-207ENST00000486080 CACNA1BQ00975 2339 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 TRAV8-7A0A075B6U6 113 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 TRAV1-2A0A0B4J238 106 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 TRGV8A0A0C4DH27 118 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 A6NIN4 97 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 SYT7O43581 403 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 APOC1P02654 83 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 STOMP27105 288 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 MAPK3P27361 379 aaPredicted RBP12.54□□□□□ -0.4
COL9A1-207ENST00000486080 SOX6P35712 828 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 UBE2NP61088 152 aaKnown RBP12.54□□□□□ -0.4
COL9A1-207ENST00000486080 P2RY6Q15077 328 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 ZNF404Q494X3 552 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 ASPHD2Q6ICH7 369 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 COMMD2Q86X83 199 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 LIX1LQ8IVB5 337 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 NANOS1Q8WY41 292 aaKnown RBP12.54□□□□□ -0.4
COL9A1-207ENST00000486080 LYZL4Q96KX0 146 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 ZNF75AQ96N20 296 aa12.54□□□□□ -0.4
COL9A1-207ENST00000486080 NXF2Q9GZY0 626 aaKnown RBP12.54□□□□□ -0.4
COL9A1-207ENST00000486080 PLEKHB1Q9UF11 243 aaPredicted RBP12.54□□□□□ -0.4
COL9A1-207ENST00000486080 C5orf49A4QMS7 147 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 LCATP04180 440 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 CCNOP22674 350 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 OPRM1P35372 400 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 CEP78Q5JTW2 689 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 BHLHA15Q7RTS1 189 aaPredicted RBP12.53□□□□□ -0.4
COL9A1-207ENST00000486080 DPPA2Q7Z7J5 298 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 FAM71F1Q96KD3 344 aaPredicted RBP12.53□□□□□ -0.4
COL9A1-207ENST00000486080 DMRTA2Q96SC8 542 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 GFI1Q99684 422 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 SLC30A2Q9BRI3 323 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 C6orf62Q9GZU0 229 aaPredicted RBP12.53□□□□□ -0.4
COL9A1-207ENST00000486080 ATPIF1Q9UII2 106 aa12.53□□□□□ -0.4
COL9A1-207ENST00000486080 AK6Q9Y3D8 172 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms