RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 LINC00304Q8N9R0 145 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 BPIFCQ8NFQ6 507 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 OR56A4Q8NGH8 313 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 OR52E5Q8NH55 327 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 PTX4Q96A99 478 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 FLYWCH2Q96CP2 140 aaKnown RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 NARS2Q96I59 477 aaKnown RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 ZNF317Q96PQ6 595 aaPredicted RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 MTG1Q9BT17 334 aaPredicted RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 SLC7A5P2Q9GIP4 190 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 ELOVL6Q9H5J4 265 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 MRPS30Q9NP92 439 aaKnown RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 DDX19AQ9NUU7 478 aaKnown RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 CLN6Q9NWW5 311 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 RCL1Q9Y2P8 373 aaKnown RBP1.55□□□□□ -2.16
GCFC2-209ENST00000486016 RFNGQ9Y644 331 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 TNS2Q63HR2 1409 aa1.55□□□□□ -2.16
GCFC2-209ENST00000486016 NUP214P35658 2090 aaPredicted RBP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 TRAV40A0A0B4J280 105 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 M0R3G1 203 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 DNASE2O00115 360 aaPredicted RBP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 CASQ2O14958 399 aaPredicted RBP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 SOCS1O15524 211 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 CDC40O60508 579 aaKnown RBP eCLIP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 FCN3O75636 299 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 HBE1P02100 147 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 LINC00869P0C866 280 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 SFTPCP11686 197 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 RAB4AP20338 218 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 IL32P24001 234 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 NPY1RP25929 384 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 NBL1P41271 181 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 TNFSF9P41273 254 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 SLC1A2P43004 574 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 SYNJ2BPP57105 145 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 UBE2MP61081 183 aaKnown RBP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 RPS23P62266 143 aaKnown RBP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 CACNG7P62955 275 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 IRF8Q02556 426 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 TCEAL5Q5H9L2 206 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 CDKL3Q8IVW4 592 aaPredicted RBP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 KATNAL2Q8IYT4 538 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 SNX31Q8N9S9 440 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 OR11H7Q8NGC8 314 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 OR4K5Q8NGD3 323 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 OR6Q1Q8NGQ2 317 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 OR6N1Q8NGY5 312 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 ESR2Q92731 530 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 TCEAL3Q969E4 200 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 DCPSQ96C86 337 aaKnown RBP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 NRBF2Q96F24 287 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 RNF145Q96MT1 663 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 FOXC2Q99958 501 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 OR52D1Q9H346 318 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 MRM3Q9HC36 420 aaKnown RBP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 LYRM4Q9HD34 91 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 SLC39A1Q9NY26 324 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 PDP1Q9P0J1 537 aaPredicted RBP1.54□□□□□ -2.16
GCFC2-209ENST00000486016 HYOU1Q9Y4L1 999 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 PHLPP2Q6ZVD8 1323 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 WDR19Q8NEZ3 1342 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 PALLDQ8WX93 1383 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 SHANK1Q9Y566 2161 aa1.54□□□□□ -2.16
GCFC2-209ENST00000486016 TRAV25A0A0B4J276 109 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 IGHV1OR15-9A0A0B4J2B8 117 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 A0A0J9YXV3 536 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 TSPAN11A1L157 253 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 A6NDN8 102 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 GOLGA8TH3BQL2 631 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 GABRPO00591 440 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 NME4O00746 187 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 PLPP1O14494 284 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 PTPRTO14522 1441 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 BPY2O14599 106 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 BCKDKO14874 412 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 REM1O75628 298 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 SEMA3DO95025 777 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 HPRT1P00492 218 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 OXTP01178 125 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 HLA-HP01893 362 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 IFNW1P05000 195 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 ASGR1P07306 291 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 OR8U9P0C7N5 309 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 UBCP0CG48 685 aaKnown RBP1.53□□□□□ -2.16
GCFC2-209ENST00000486016 USF1P22415 310 aaPredicted RBP1.53□□□□□ -2.16
GCFC2-209ENST00000486016 RBM34P42696 430 aaKnown RBP1.53□□□□□ -2.16
GCFC2-209ENST00000486016 SLC11A1P49279 550 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 RAB7AP51149 207 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 ZNF121P58317 390 aaPredicted RBP1.53□□□□□ -2.16
GCFC2-209ENST00000486016 RPS15AP62244 130 aaKnown RBP1.53□□□□□ -2.16
GCFC2-209ENST00000486016 ART3Q13508 389 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 DGCR6Q14129 220 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 PRSS8Q16651 343 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 TRMT5Q32P41 509 aaKnown RBP1.53□□□□□ -2.16
GCFC2-209ENST00000486016 GCSAMLQ5JQS6 135 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 STUMQ69YW2 141 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 SHISA6Q6ZSJ9 500 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 SLC16A13Q7RTY0 426 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 NEGR1Q7Z3B1 354 aa1.53□□□□□ -2.16
GCFC2-209ENST00000486016 SNX20Q7Z614 316 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms