RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 MAPRE2Q15555 327 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 RSPO1Q2MKA7 263 aaPredicted RBP10.09□□□□□ -0.79
SSR4-210ENST00000485612 FBXW12Q6X9E4 464 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 GDPGP1Q6ZNW5 385 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 CBLL1Q75N03 491 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 GLB1L2Q8IW92 636 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 RNF113BQ8IZP6 322 aaKnown RBP10.09□□□□□ -0.79
SSR4-210ENST00000485612 PCYOX1LQ8NBM8 494 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 OR8G5Q8NG78 346 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 SLC7A13Q8TCU3 470 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 PHF21AQ96BD5 680 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 NEIL1Q96FI4 390 aaPredicted RBP10.09□□□□□ -0.79
SSR4-210ENST00000485612 CDADC1Q9BWV3 514 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 TUBG2Q9NRH3 451 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 VSX1Q9NZR4 365 aaPredicted RBP10.09□□□□□ -0.79
SSR4-210ENST00000485612 SIGLEC7Q9Y286 467 aa10.09□□□□□ -0.79
SSR4-210ENST00000485612 IQCF6A8MYZ5 107 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 SASH3O75995 380 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 NDUFB2O95178 105 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 SERPINA1P01009 418 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 TROVE2P10155 538 aaKnown RBP eCLIP10.08□□□□□ -0.8
SSR4-210ENST00000485612 NCK1P16333 377 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 ANOS1P23352 680 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 CDKN2AP42771 156 aaKnown RBP10.08□□□□□ -0.8
SSR4-210ENST00000485612 FGF12P61328 243 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 LSM6P62312 80 aaKnown RBP10.08□□□□□ -0.8
SSR4-210ENST00000485612 HIST1H3AP68431 136 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 SEC23BQ15437 767 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 ZNF404Q494X3 552 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 HIST2H3PS2Q5TEC6 136 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 SLC27A4Q6P1M0 643 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 HIST2H3AQ71DI3 136 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 FITM2Q8N6M3 262 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 OR13G1Q8NGZ3 307 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 RSRC1Q96IZ7 334 aaKnown RBP10.08□□□□□ -0.8
SSR4-210ENST00000485612 NUDT16L1Q9BRJ7 211 aaKnown RBP10.08□□□□□ -0.8
SSR4-210ENST00000485612 NMNAT1Q9HAN9 279 aaPredicted RBP10.08□□□□□ -0.8
SSR4-210ENST00000485612 NRIP3Q9NQ35 241 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 MIOXQ9UGB7 285 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 RPS6KA6Q9UK32 745 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 POLR1DQ9Y2S0 133 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 IER3IP1Q9Y5U9 82 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 CAPN7Q9Y6W3 813 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 DYNC2H1Q8NCM8 4307 aaKnown RBP10.08□□□□□ -0.8
SSR4-210ENST00000485612 SACSQ9NZJ4 4579 aa10.08□□□□□ -0.8
SSR4-210ENST00000485612 IGLV1-36A0A0B4J1U3 117 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 C22orf46C9J442 243 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 GSTA4O15217 222 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 AHCYL1O43865 530 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 TSPAN9O75954 239 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 DIRAS1O95057 198 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 PPP1R3DO95685 299 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 CPT2P23786 658 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 IER3P46695 156 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 OMPP47874 163 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 PITPNBP48739 271 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 CENPAP49450 140 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 SRP9P49458 86 aaKnown RBP10.07□□□□□ -0.8
SSR4-210ENST00000485612 GSK3BP49841 420 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 SLC7A2P52569 658 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 KCNMB1Q16558 191 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 FGD3Q5JSP0 725 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 PRAMEF6Q5VXH4 476 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 FOXB2Q5VYV0 432 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 DHRS7BQ6IAN0 325 aaPredicted RBP10.07□□□□□ -0.8
SSR4-210ENST00000485612 CFAP77Q6ZQR2 320 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 FKBP9P1Q75LS8 142 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 HDXQ7Z353 690 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 NAA40Q86UY6 237 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 LINC00346Q8IVM7 164 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 OR8B3Q8NGG8 313 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 APOBEC3DQ96AK3 386 aaPredicted RBP10.07□□□□□ -0.8
SSR4-210ENST00000485612 ITPKCQ96DU7 683 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 COG8Q96MW5 612 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 ZNF582Q96NG8 517 aaPredicted RBP10.07□□□□□ -0.8
SSR4-210ENST00000485612 OR8B2Q96RD0 313 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 GPX7Q96SL4 187 aaPredicted RBP10.07□□□□□ -0.8
SSR4-210ENST00000485612 COQ7Q99807 217 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 FN3KRPQ9HA64 309 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 KIF17Q9P2E2 1029 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 ATPIF1Q9UII2 106 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 TMEM5Q9Y2B1 443 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 ENPP4Q9Y6X5 453 aa10.07□□□□□ -0.8
SSR4-210ENST00000485612 TRBV4-1A0A0J9YWV2 114 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 A0A1B0GWJ7 208 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 J3QW42 95 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 K7EIL1 84 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 IFNL4K9M1U5 179 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 FAM20BO75063 409 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 H1F0P07305 194 aaKnown RBP10.06□□□□□ -0.8
SSR4-210ENST00000485612 SFTPBP07988 381 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 RGS6P49758 472 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 MAB21L1Q13394 359 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 MPPED2Q15777 294 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 ZNF181Q2M3W8 571 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 CLEC12AQ5QGZ9 265 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 WDR25Q64LD2 544 aaPredicted RBP10.06□□□□□ -0.8
SSR4-210ENST00000485612 GPR139Q6DWJ6 353 aa10.06□□□□□ -0.8
SSR4-210ENST00000485612 ZNF841Q6ZN19 808 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms