RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	PRR20A	P86496	221 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	COX10	Q12887	443 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	BAMBI	Q13145	260 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	TUSC1	Q2TAM9	212 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	SAMD4B	Q5PRF9	694 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	LRRN1	Q6UXK5	716 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	PGAP1	Q75T13	922 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	MRPL21	Q7Z2W9	205 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	KLB	Q86Z14	1044 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	OR6V1	Q8N148	313 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	FAM86B1	Q8N7N1	296 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	DEFB108B	Q8NET1	73 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	SDR9C7	Q8NEX9	313 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	DHRS1	Q96LJ7	313 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	SLC30A2	Q9BRI3	323 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	FN3K	Q9H479	309 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	IGLV1-36	A0A0B4J1U3	117 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	DCTN6	O00399	190 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	IDH3B	O43837	385 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	WNT2	P09544	360 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	HKR1	P10072	659 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	GGT2	P36268	569 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	HIST1H3A	P68431	136 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	TRAP1	Q12931	704 aa	Known RBP	11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	HIST2H3PS2	Q5TEC6	136 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	SLC18B1	Q6NT16	456 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	RPL13AP3	Q6NVV1	102 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	CFAP77	Q6ZQR2	320 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	HIST2H3A	Q71DI3	136 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	PGAM4	Q8N0Y7	254 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	PARP8	Q8N3A8	854 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	SLC26A10	Q8NG04	563 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	SPTSSA	Q969W0	71 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	DUX5	Q96PT3	197 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF747	Q9BV97	191 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	C1QTNF5	Q9BXJ0	243 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	MYLK2	Q9H1R3	596 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	NDE1	Q9NXR1	346 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF69	Q9UC07	566 aa		11.11	□□□□□ -0.63
UBA3-210	ENST00000485424	DNAJC9-AS1	A6NH13	148 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	MLNR	O43193	412 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	HLA-DPB1	P04440	258 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	ACSM4	P0C7M7	580 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	HSD17B1	P14061	328 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	PRTN3	P24158	256 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	TSPAN31	Q12999	210 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	TAF13	Q15543	124 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	OR8G1	Q15617	311 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	KCNJ8	Q15842	424 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF181	Q2M3W8	571 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	SLC35F1	Q5T1Q4	408 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	C16orf89	Q6UX73	402 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	DOK3	Q7L591	496 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	ZBTB46	Q86UZ6	589 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	ZDHHC21	Q8IVQ6	265 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	PROKR2	Q8NFJ6	384 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	OR4C15	Q8NGM1	316 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	ERGIC1	Q969X5	290 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	SLC25A28	Q96A46	364 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	SLCO4A1	Q96BD0	722 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	TMEM246	Q9BRR3	403 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	SLC22A4	Q9H015	551 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF696	Q9H7X3	374 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	KIF17	Q9P2E2	1029 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	CLN8	Q9UBY8	286 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	KCNG2	Q9UJ96	466 aa		11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	PRKDC	P78527	4128 aa	Known RBP	11.1	□□□□□ -0.63
UBA3-210	ENST00000485424	IGHV3OR16-10	A0A075B7F0	116 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	TRAV40	A0A0B4J280	105 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	IGHV2-70D	A0A0C4DH43	119 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	GGT3P	A6NGU5	568 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424		M0R135	149 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	ARPC2	O15144	300 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	MSX2	P35548	267 aa	Predicted RBP	11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	PITPNB	P48739	271 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	GK2	Q14410	553 aa	Predicted RBP	11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF404	Q494X3	552 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	CLEC12A	Q5QGZ9	265 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	SHISA2	Q6UWI4	295 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF620	Q6ZNG0	422 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	LINC00471	Q8N535	108 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	CELF2-AS1	Q8N7Q2	184 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	OR2T4	Q8NH00	348 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	RAB40A	Q8WXH6	277 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF799	Q96GE5	643 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	C1orf147	Q96MC9	270 aa	Predicted RBP	11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	TECTB	Q96PL2	329 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	CDRT15	Q96T59	188 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	FUZ	Q9BT04	418 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	FN3KRP	Q9HA64	309 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	TMEM165	Q9HC07	324 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	UFSP2	Q9NUQ7	469 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	TBC1D23	Q9NUY8	699 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	TAGLN3	Q9UI15	199 aa		11.09	□□□□□ -0.63
UBA3-210	ENST00000485424	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.08	□□□□□ -0.64
UBA3-210	ENST00000485424	OR6C68	A6NDL8	312 aa		11.08	□□□□□ -0.64

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