RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TCF21O43680 179 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 FSTL3O95633 263 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 CLPTM1O96005 669 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 PPIAL4FP0DN26 164 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 GAAP10253 952 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 NCK1P16333 377 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 CTLA4P16410 223 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 COL8A2P25067 703 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 WNT5AP41221 380 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 MAGEB1P43366 347 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 MMP15P51511 669 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 GNGT1P63211 74 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 TNFAIP6P98066 277 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 CD83Q01151 205 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 MZT1Q08AG7 82 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 TSPAN31Q12999 210 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 MALLQ13021 153 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ENDOGQ14249 297 aaKnown RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 FAM98BQ52LJ0 330 aaKnown RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 MESTQ5EB52 335 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF774Q6NX45 483 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 C1orf94Q6P1W5 598 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 FBXW12Q6X9E4 464 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 IGFN1Q86VF2 1251 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 THNSL2Q86YJ6 484 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ZDHHC21Q8IVQ6 265 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF101Q8IZC7 436 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 DEFB107AQ8IZN7 70 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 MUC20Q8N307 709 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 OR13G1Q8NGZ3 307 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 OR2T4Q8NH00 348 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 OR52J3Q8NH60 311 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 CLDND2Q8NHS1 167 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 SLC25A40Q8TBP6 338 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 GNPDA2Q8TDQ7 276 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ST7LQ8TDW4 575 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF418Q8TF45 676 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 CCL17Q92583 94 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ERGIC1Q969X5 290 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 FOXRED1Q96CU9 486 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 HAVCR1Q96D42 359 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF582Q96NG8 517 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ERMAPQ96PL5 475 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 FUZQ9BT04 418 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 IFT27Q9BW83 186 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 HCAR1Q9BXC0 346 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 NUAK2Q9H093 628 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 OR51B6Q9H340 312 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 OPA3Q9H6K4 179 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 MAGIXQ9H6Y5 334 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF665Q9H7R5 613 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 SP140LQ9H930 580 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 MYEF2Q9P2K5 600 aaKnown RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 IL19Q9UHD0 177 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 KLHL21Q9UJP4 597 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 PRPF19Q9UMS4 504 aaKnown RBP5.23□□□□□ -1.57
PTCD3-215ENST00000484203 BAIAP2Q9UQB8 552 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 H7C1C5 153 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 TNFRSF11BO00300 401 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 SOCS2O14508 198 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 SPRY3O43610 288 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 CDC14BO60729 498 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 FOXH1O75593 365 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 NCR1O76036 304 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 FAM107AO95990 144 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 PNPP00491 289 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 IFNGP01579 166 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 IGHV1-46P01743 117 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 HLA-DQA2P01906 255 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 APOC1P02654 83 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 SEMG1P04279 462 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF823P16415 610 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 CALB2P22676 271 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 MAGEA2P43356 314 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 GSSP48637 474 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 SRP9P49458 86 aaKnown RBP5.22□□□□□ -1.57
PTCD3-215ENST00000484203 TPTEP56180 551 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 ERVS71-1P61550 626 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 LMO4P61968 165 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 LCN6P62502 163 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 COX10Q12887 443 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 PSG7Q13046 419 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 CCNIQ14094 377 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 TRIM25Q14258 630 aaKnown RBP5.22□□□□□ -1.57
PTCD3-215ENST00000484203 SEC23BQ15437 767 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 TRIP10Q15642 601 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 TSTQ16762 297 aaKnown RBP5.22□□□□□ -1.57
PTCD3-215ENST00000484203 ALKBH6Q3KRA9 238 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 TMEM155Q4W5P6 130 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 SPATA46Q5T0L3 261 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 FAHD2BQ6P2I3 314 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-215ENST00000484203 LEG1Q6P5S2 330 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF620Q6ZNG0 422 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 RFPL4BQ6ZWI9 263 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 USP43Q70EL4 1123 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 TSEN54Q7Z6J9 526 aaKnown RBP5.22□□□□□ -1.57
PTCD3-215ENST00000484203 ZBTB46Q86UZ6 589 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 DHFR2Q86XF0 187 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 KLBQ86Z14 1044 aa5.22□□□□□ -1.57
PTCD3-215ENST00000484203 C1orf87Q8N0U7 546 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms