RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 EGR3Q06889 387 aa13.62□□□□□ -0.23
DDR1-244ENST00000482873 GLYATL3Q5SZD4 288 aa13.62□□□□□ -0.23
DDR1-244ENST00000482873 C10orf91Q5T1B1 145 aa13.62□□□□□ -0.23
DDR1-244ENST00000482873 LINC00346Q8IVM7 164 aa13.62□□□□□ -0.23
DDR1-244ENST00000482873 INO80EQ8NBZ0 244 aaPredicted RBP13.62□□□□□ -0.23
DDR1-244ENST00000482873 OR4A4PQ8NGN8 299 aa13.62□□□□□ -0.23
DDR1-244ENST00000482873 SLC41A2Q96JW4 573 aa13.62□□□□□ -0.23
DDR1-244ENST00000482873 ARL5BQ96KC2 179 aa13.62□□□□□ -0.23
DDR1-244ENST00000482873 ZNF587Q96SQ5 575 aaPredicted RBP13.62□□□□□ -0.23
DDR1-244ENST00000482873 WWTR1Q9GZV5 400 aa13.62□□□□□ -0.23
DDR1-244ENST00000482873 CGGBP1Q9UFW8 167 aaPredicted RBP13.62□□□□□ -0.23
DDR1-244ENST00000482873 TMED7Q9Y3B3 224 aa13.62□□□□□ -0.23
DDR1-244ENST00000482873 MRPS18BQ9Y676 258 aaKnown RBP13.62□□□□□ -0.23
DDR1-244ENST00000482873 MEX3AA1L020 520 aaKnown RBP13.61□□□□□ -0.23
DDR1-244ENST00000482873 FITM1A5D6W6 292 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 TMEM235A6NFC5 223 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 TMEM200CA6NKL6 621 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 EIF1AYO14602 144 aaKnown RBP13.61□□□□□ -0.23
DDR1-244ENST00000482873 CD74P04233 296 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 IFI6P09912 130 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 SFTPCP11686 197 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 PGAM2P15259 253 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 EIF1AXP47813 144 aaKnown RBP13.61□□□□□ -0.23
DDR1-244ENST00000482873 FBXW4P57775 412 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 HNRNPKP61978 463 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDR1-244ENST00000482873 ADAM8P78325 824 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 INSM1Q01101 510 aaPredicted RBP13.61□□□□□ -0.23
DDR1-244ENST00000482873 MFGE8Q08431 387 aaPredicted RBP13.61□□□□□ -0.23
DDR1-244ENST00000482873 SLC25A45Q8N413 288 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 MRGPRFQ96AM1 343 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 ADAM19Q9H013 955 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 FGF21Q9NSA1 209 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 PPP1R14DQ9NXH3 145 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 CARHSP1Q9Y2V2 147 aaKnown RBP13.61□□□□□ -0.23
DDR1-244ENST00000482873 IGKV3D-11A0A0A0MRZ8 115 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 H3BMH7 237 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 H3BML4 177 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 ZNF217O75362 1048 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 BGLAPP02818 100 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 GP1BBP13224 206 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 NFYBP25208 207 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 ELAVL1Q15717 326 aaKnown RBP13.61□□□□□ -0.23
DDR1-244ENST00000482873 EEF1A1P5Q5VTE0 462 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 BEND4Q6ZU67 534 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 SLC38A9Q8NBW4 561 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 RXFP4Q8TDU9 374 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 ADAMTS18Q8TE60 1221 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 SFT2D1Q8WV19 159 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 PIK3IP1Q96FE7 263 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 COPS7AQ9UBW8 275 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 B9D1Q9UPM9 204 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 KIF26BQ2KJY2 2108 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 COL4A2P08572 1712 aa13.61□□□□□ -0.23
DDR1-244ENST00000482873 EEF1E1-BLOC1S5C9J1V9 151 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 OR2T1O43869 369 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 APEHP13798 732 aaKnown RBP13.6□□□□□ -0.23
DDR1-244ENST00000482873 HTR2CP28335 458 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 COL13A1Q5TAT6 717 aaPredicted RBP13.6□□□□□ -0.23
DDR1-244ENST00000482873 TMEM225Q6GV28 225 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 C5orf46Q6UWT4 87 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 LYG2Q86SG7 212 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 SELENOIQ9C0D9 397 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 LAT2Q9GZY6 243 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 GSN-AS1Q9NRJ2 163 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 MRPL22Q9NWU5 206 aaKnown RBP13.6□□□□□ -0.23
DDR1-244ENST00000482873 COA3Q9Y2R0 106 aaPredicted RBP13.6□□□□□ -0.23
DDR1-244ENST00000482873 A0A1W2PPC1 479 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 PMS2P1A4D2B8 440 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 LMX1BO60663 402 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 PIAS2O75928 621 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 SRFP11831 508 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 HLA-GP17693 338 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 ARRB1P49407 418 aaPredicted RBP13.6□□□□□ -0.23
DDR1-244ENST00000482873 CXADRP78310 365 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 IL13RA1P78552 427 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 PMPCAQ10713 525 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 TDGQ13569 410 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 DMRTC1Q5HYR2 192 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 PAPD4Q6PIY7 484 aaKnown RBP13.6□□□□□ -0.23
DDR1-244ENST00000482873 SLC29A4Q7RTT9 530 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 SLC25A42Q86VD7 318 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 OR51A2Q8NGJ7 313 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 EMC6Q9BV81 110 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 MED29Q9NX70 200 aa13.6□□□□□ -0.23
DDR1-244ENST00000482873 LOC101059948A0A1B0GTJ6 334 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 C9orf170A2RU37 121 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 DCDC2BA2VCK2 349 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 MBTPS2O43462 519 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 GDF9O60383 454 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 CD79AP11912 226 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 ANKRD39Q53RE8 183 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 KCTD9Q7L273 389 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 PAQR4Q8N4S7 273 aaPredicted RBP13.59□□□□□ -0.23
DDR1-244ENST00000482873 OTOSQ8NHW6 89 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 CASTOR1Q8WTX7 329 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 MITD1Q8WV92 249 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 ZFP57Q9NU63 452 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 TAS2R4Q9NYW5 299 aa13.59□□□□□ -0.23
DDR1-244ENST00000482873 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms