RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ZNF665Q9H7R5 613 aa10.06□□□□□ -0.8
HMGN1-213ENST00000482192 PPP1R3CQ9UQK1 317 aa10.06□□□□□ -0.8
HMGN1-213ENST00000482192 ISPDA4D126 451 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 ZNF878C9JN71 531 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 DEAF1O75398 565 aaPredicted RBP10.05□□□□□ -0.8
HMGN1-213ENST00000482192 TIPRLO75663 272 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 HMGN1P05114 100 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 PRKACGP22612 351 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 GSTT1P30711 240 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 OTX1P32242 354 aaPredicted RBP10.05□□□□□ -0.8
HMGN1-213ENST00000482192 THBS2P35442 1172 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 SLC15A1P46059 708 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 SRP9P49458 86 aaKnown RBP10.05□□□□□ -0.8
HMGN1-213ENST00000482192 GINS1Q14691 196 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 TAF13Q15543 124 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 LINC01590Q5TEZ4 76 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 ACSM5Q6NUN0 579 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 PLBD1Q6P4A8 553 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 PGAP1Q75T13 922 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 MRPL21Q7Z2W9 205 aaKnown RBP10.05□□□□□ -0.8
HMGN1-213ENST00000482192 NAA40Q86UY6 237 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 ZNF283Q8N7M2 679 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 OR10AD1Q8NGE0 317 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 ST7LQ8TDW4 575 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 OTULINQ96BN8 352 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 SLAMF6Q96DU3 332 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 NRBF2Q96F24 287 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 OR2V2Q96R30 315 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 INTS14Q96SY0 518 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 KCNJ15Q99712 375 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 GAL3ST1Q99999 423 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 SLC30A2Q9BRI3 323 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 MED20Q9H944 212 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 LPAR2Q9HBW0 351 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 TMEM106BQ9NUM4 274 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 HIF1ANQ9NWT6 349 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 KIF17Q9P2E2 1029 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 ABCA2Q9BZC7 2435 aa10.05□□□□□ -0.8
HMGN1-213ENST00000482192 YLPM1P49750 1951 aaKnown RBP10.05□□□□□ -0.8
HMGN1-213ENST00000482192 TRAV20A0A0B4J274 112 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 A0A1B0GWJ7 208 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 PRR23D1E9PI22 279 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-213ENST00000482192 IFNL4K9M1U5 179 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 GLCEO94923 617 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 IGHV2-5P01817 119 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 PRR23D2P0DMB1 279 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-213ENST00000482192 GRB2P62993 217 aaKnown RBP10.04□□□□□ -0.8
HMGN1-213ENST00000482192 CDK5Q00535 292 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 EIF2B1Q14232 305 aaKnown RBP10.04□□□□□ -0.8
HMGN1-213ENST00000482192 SNAI3Q3KNW1 292 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 C1orf146Q5VVC0 180 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 FAHD1Q6P587 224 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 ERI1Q8IV48 349 aaKnown RBP10.04□□□□□ -0.8
HMGN1-213ENST00000482192 ITLN1Q8WWA0 313 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 UTP4Q969X6 686 aaKnown RBP10.04□□□□□ -0.8
HMGN1-213ENST00000482192 MDFIQ99750 246 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 MARCH7Q9H992 704 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 NTN4Q9HB63 628 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 GCM1Q9NP62 436 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 PAPOLBQ9NRJ5 636 aaKnown RBP10.04□□□□□ -0.8
HMGN1-213ENST00000482192 CENPMQ9NSP4 180 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 TMEM100Q9NV29 134 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 NPTNQ9Y639 398 aa10.04□□□□□ -0.8
HMGN1-213ENST00000482192 MLNRO43193 412 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 PRODHO43272 600 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 IGHV2-70P01814 119 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 SRP14P37108 136 aaKnown RBP10.03□□□□□ -0.8
HMGN1-213ENST00000482192 MMP16P51512 607 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 PRSS12P56730 875 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 BTG1P62324 171 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 ATP6AP1Q15904 470 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 SPATC1Q76KD6 591 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 RHOUQ7L0Q8 258 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 SHFQ7M4L6 423 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 DPY19L4Q7Z388 723 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 PARP8Q8N3A8 854 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 KLHL36Q8N4N3 616 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 SPICQ8N5J4 248 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 OR6N2Q8NGY6 317 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 SPRYD4Q8WW59 207 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-213ENST00000482192 PLEKHA8Q96JA3 519 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 MEGF10Q96KG7 1140 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 ABHD6Q9BV23 337 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 SLC22A4Q9H015 551 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 OR51V1Q9H2C8 321 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 TOR3AQ9H497 397 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 OPA3Q9H6K4 179 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 SLC25A19Q9HC21 320 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 DCAF16Q9NXF7 216 aa10.03□□□□□ -0.8
HMGN1-213ENST00000482192 NOP16Q9Y3C1 178 aaKnown RBP10.03□□□□□ -0.8
HMGN1-213ENST00000482192 SONP18583 2426 aaKnown RBP10.03□□□□□ -0.8
HMGN1-213ENST00000482192 A0A0G2JMP0 313 aa10.02□□□□□ -0.81
HMGN1-213ENST00000482192 A0A0X1KG70 313 aa10.02□□□□□ -0.81
HMGN1-213ENST00000482192 LRRC30A6NM36 301 aa10.02□□□□□ -0.81
HMGN1-213ENST00000482192 CD300LBA8K4G0 201 aa10.02□□□□□ -0.81
HMGN1-213ENST00000482192 F5H5P2 479 aa10.02□□□□□ -0.81
HMGN1-213ENST00000482192 G3V2T6 193 aa10.02□□□□□ -0.81
HMGN1-213ENST00000482192 H0YL77 283 aa10.02□□□□□ -0.81
HMGN1-213ENST00000482192 PHF1O43189 567 aaPredicted RBP10.02□□□□□ -0.81
HMGN1-213ENST00000482192 XRCC2O43543 280 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms