RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 AKR7LQ8NHP1 331 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 GCDHQ92947 438 aaPredicted RBP17.16■□□□□ 0.34
CCM2-214ENST00000481194 EMG1Q92979 244 aaKnown RBP17.16■□□□□ 0.34
CCM2-214ENST00000481194 TP63Q9H3D4 680 aaPredicted RBP17.16■□□□□ 0.34
CCM2-214ENST00000481194 OR14J1Q9UGF5 321 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 TCF20Q9UGU0 1960 aaKnown RBP17.16■□□□□ 0.34
CCM2-214ENST00000481194 UQCRC1P31930 480 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 OPRM1P35372 400 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 RGS7BPQ6MZT1 257 aaPredicted RBP17.16■□□□□ 0.34
CCM2-214ENST00000481194 OR8H1Q8NGG4 311 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 CGGBP1Q9UFW8 167 aaPredicted RBP17.16■□□□□ 0.34
CCM2-214ENST00000481194 IFNA7P01567 189 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 RBMS2Q15434 407 aaKnown RBP17.16■□□□□ 0.34
CCM2-214ENST00000481194 LSRQ86X29 649 aaPredicted RBP17.16■□□□□ 0.34
CCM2-214ENST00000481194 WFDC8Q8IUA0 241 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 ING1Q9UK53 422 aaPredicted RBP17.16■□□□□ 0.34
CCM2-214ENST00000481194 NME2P1O60361 137 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 NME2P22392 152 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 FOXL2P58012 376 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 TNK1Q13470 666 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 RSPO4Q2I0M5 234 aaPredicted RBP17.15■□□□□ 0.34
CCM2-214ENST00000481194 SOWAHCQ53LP3 525 aaPredicted RBP17.15■□□□□ 0.34
CCM2-214ENST00000481194 CREB3L2Q70SY1 520 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 OR5D18Q8NGL1 313 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 S100A9P06702 114 aaKnown RBP17.15■□□□□ 0.34
CCM2-214ENST00000481194 BPIFB2Q8N4F0 458 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 GSKIPQ9P0R6 139 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 PPA1Q15181 289 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 SMAP2Q8WU79 429 aaPredicted RBP17.15■□□□□ 0.34
CCM2-214ENST00000481194 PPA2Q9H2U2 334 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 FAIMQ9NVQ4 179 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 EHFQ9NZC4 300 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 A0A1W2PPH5 198 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 EPPINO95925 133 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 PCMT1P22061 227 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 IL2RGP31785 369 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 ZC3HAV1LQ96H79 300 aaKnown RBP17.15■□□□□ 0.34
CCM2-214ENST00000481194 SLC17A5Q9NRA2 495 aa17.15■□□□□ 0.34
CCM2-214ENST00000481194 NPIPB9F8W1W9 429 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 GABARAPH6UMI1 98 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 WDR38Q5JTN6 314 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 TMEM251Q8N6I4 163 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 C10orf35Q96D05 121 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 OCSTAMPQ9BR26 566 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 OR2B2Q9GZK3 357 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 MAGEB4O15481 346 aaPredicted RBP17.14■□□□□ 0.33
CCM2-214ENST00000481194 ZNF32P17041 273 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 PCK2Q16822 640 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 RRNAD1Q96FB5 475 aaKnown RBP17.14■□□□□ 0.33
CCM2-214ENST00000481194 IMMP1LQ96LU5 166 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 PLXNA2O75051 1894 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 TGFBR3LH3BV60 316 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 NOX3Q9HBY0 568 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 TRAPPC2LQ9UL33 140 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 MPGP29372 298 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 BCL2A1Q16548 175 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 GPR155Q7Z3F1 870 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 NFAM1Q8NET5 270 aaPredicted RBP17.14■□□□□ 0.33
CCM2-214ENST00000481194 OR56B4Q8NH76 319 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 ZNF416Q9BWM5 594 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 SCN3AQ9NY46 2000 aa17.14■□□□□ 0.33
CCM2-214ENST00000481194 SULT1C2O00338 296 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 SC5DO75845 299 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 DHRS3O75911 302 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 SRP9P49458 86 aaKnown RBP17.13■□□□□ 0.33
CCM2-214ENST00000481194 SSBP1Q04837 148 aaKnown RBP17.13■□□□□ 0.33
CCM2-214ENST00000481194 AKIRIN2Q53H80 203 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 SLC22A25Q6T423 547 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 UQCC2Q9BRT2 126 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 LRP5LA4QPB2 252 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 CDK10Q15131 360 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 KCNJ8Q15842 424 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 ANKRD16Q6P6B7 361 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 C1orf87Q8N0U7 546 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 ARHGEF39Q8N4T4 335 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 SLC30A7Q8NEW0 376 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 OR51F2Q8NH61 342 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 SFTPBP07988 381 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 FXYD4P59646 89 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 ZNF85Q03923 595 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 MRPL41Q8IXM3 137 aaKnown RBP17.13■□□□□ 0.33
CCM2-214ENST00000481194 TOMM40LQ969M1 308 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 OR2M2Q96R28 347 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 RBFOX1Q9NWB1 397 aaKnown RBP17.13■□□□□ 0.33
CCM2-214ENST00000481194 ARPC1BO15143 372 aaKnown RBP17.13■□□□□ 0.33
CCM2-214ENST00000481194 WDR1O75083 606 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 MT-ND4P03905 459 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 HLA-DMAP28067 261 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 SEC61A1P61619 476 aaKnown RBP17.13■□□□□ 0.33
CCM2-214ENST00000481194 PABPC1L2AQ5JQF8 200 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 APOOLQ6UXV4 268 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 PRO3102Q9H379 93 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 IL17BQ9UHF5 180 aa17.13■□□□□ 0.33
CCM2-214ENST00000481194 TDRD6O60522 2096 aaKnown RBP17.13■□□□□ 0.33
CCM2-214ENST00000481194 NPIPB13A6NJU9 1138 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 NPIPB4C9JG80 1138 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 DEGS1O15121 323 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 OGG1O15527 345 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 RDH10Q8IZV5 341 aa17.12■□□□□ 0.33
CCM2-214ENST00000481194 OR13C5Q8NGS8 318 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms