RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 DBTP11182 482 aaKnown RBP16.91■□□□□ 0.3
LIME1-205ENST00000480139 RAC2P15153 192 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 CDKN1AP38936 164 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 CX3CR1P49238 355 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 PRKXP51817 358 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 CXCR4P61073 352 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 ACTC1P68032 377 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 ACTA1P68133 377 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 ZNF322Q6U7Q0 402 aaPredicted RBP16.91■□□□□ 0.3
LIME1-205ENST00000480139 LRRN1Q6UXK5 716 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 NAA40Q86UY6 237 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 RFLNBQ8N5W9 214 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 ZNF283Q8N7M2 679 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 POFUT1Q9H488 388 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 MRPS18AQ9NVS2 196 aaKnown RBP16.91■□□□□ 0.3
LIME1-205ENST00000480139 CGGBP1Q9UFW8 167 aaPredicted RBP16.91■□□□□ 0.3
LIME1-205ENST00000480139 RPL36Q9Y3U8 105 aaKnown RBP16.91■□□□□ 0.3
LIME1-205ENST00000480139 LRP12Q9Y561 859 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 A0A1W2PPW3 197 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 PRR32B1ATL7 298 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 GNAO1P09471 354 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 KITLGP21583 273 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 MPV17P39210 176 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 HSPA13P48723 471 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 PSMA6P60900 246 aaKnown RBP16.9■□□□□ 0.3
LIME1-205ENST00000480139 RAB40BQ12829 278 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 MALLQ13021 153 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 PRSS45Q7RTY3 260 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 FBLIM1Q8WUP2 373 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 HAVCR1Q96D42 359 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 MS4A5Q9H3V2 200 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 DYNLRB1Q9NP97 96 aa16.9■□□□□ 0.3
LIME1-205ENST00000480139 A0A1W2PQL4 384 aaPredicted RBP16.89■□□□□ 0.29
LIME1-205ENST00000480139 ACOD1A6NK06 481 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 APOL3O95236 402 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 ART1P52961 327 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 ZNF121P58317 390 aaPredicted RBP16.89■□□□□ 0.29
LIME1-205ENST00000480139 PSG7Q13046 419 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 SNAI3Q3KNW1 292 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 TMEM255AQ5JRV8 349 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 OR10H4Q8NGA5 316 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 OR52H1Q8NGJ2 320 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 CNIH3Q8TBE1 160 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 LGALS12Q96DT0 336 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 OPA3Q9H6K4 179 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 BARX1Q9HBU1 254 aaPredicted RBP16.89■□□□□ 0.29
LIME1-205ENST00000480139 CYSLTR2Q9NS75 346 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 PTTG3PQ9NZH4 202 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 TAAR3PQ9P1P4 343 aa16.89■□□□□ 0.29
LIME1-205ENST00000480139 MYO9AB2RTY4 2548 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 XRCC2O43543 280 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 MT-ND5P03915 603 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 ANXA2P07355 339 aaKnown RBP16.88■□□□□ 0.29
LIME1-205ENST00000480139 LIPAP38571 399 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 VHLP40337 213 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 RIDAP52758 137 aaKnown RBP16.88■□□□□ 0.29
LIME1-205ENST00000480139 ATP5J2P56134 94 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 GK2Q14410 553 aaPredicted RBP16.88■□□□□ 0.29
LIME1-205ENST00000480139 NKPD1Q17RQ9 610 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 KLHL22Q53GT1 634 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 C6orf52Q5T4I8 152 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 ZNF684Q5T5D7 378 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 PRSS57Q6UWY2 283 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 IZUMO2Q6UXV1 221 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 THAP5Q7Z6K1 395 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 SNX33Q8WV41 574 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 CMBLQ96DG6 245 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 PERPQ96FX8 193 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 PURGQ9UJV8 347 aaKnown RBP16.88■□□□□ 0.29
LIME1-205ENST00000480139 IKZF2Q9UKS7 526 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 USF3Q68DE3 2245 aa16.88■□□□□ 0.29
LIME1-205ENST00000480139 PRRC2AP48634 2157 aaKnown RBP16.87■□□□□ 0.29
LIME1-205ENST00000480139 SULT1C4O75897 302 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 FADS2O95864 444 aaKnown RBP16.87■□□□□ 0.29
LIME1-205ENST00000480139 IGHV4-39P01824 125 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 IGHA1P01876 353 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 ERCC1P07992 297 aaPredicted RBP16.87■□□□□ 0.29
LIME1-205ENST00000480139 ADRA2AP08913 450 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 SLC2A1P11166 492 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 SELEP16581 610 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 ALDH3B1P43353 468 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 MMP15P51511 669 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 MMP16P51512 607 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 CDK5R2Q13319 367 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 TESK1Q15569 626 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 SMN1Q16637 294 aaKnown RBP16.87■□□□□ 0.29
LIME1-205ENST00000480139 ZNF829Q3KNS6 432 aaPredicted RBP16.87■□□□□ 0.29
LIME1-205ENST00000480139 ZMAT1Q5H9K5 638 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 SSX6Q7RTT6 188 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 EGFL6Q8IUX8 553 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 ACBD7Q8N6N7 88 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 SPSB4Q96A44 273 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 MYCBPQ99417 103 aaPredicted RBP16.87■□□□□ 0.29
LIME1-205ENST00000480139 TBX5Q99593 518 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 JAM3Q9BX67 310 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 RAB1BQ9H0U4 201 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 RGCCQ9H4X1 137 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 AMBNQ9NP70 447 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 INPP5EQ9NRR6 644 aa16.87■□□□□ 0.29
LIME1-205ENST00000480139 FAM206AQ9NX38 181 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms