RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ZNF180Q9UJW8 692 aa9.4□□□□□ -0.9
USP11-208ENST00000480104 PPP2R2CQ9Y2T4 447 aa9.4□□□□□ -0.9
USP11-208ENST00000480104 A0A0B4J2E0 115 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 A0A1B0GX12 115 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 A6NLC8 198 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 TRIM64CA6NLI5 447 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 C12orf71A8MTZ7 269 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 J3QW42 95 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 SGCEO43556 437 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 PTBP3O95758 552 aaKnown RBP9.39□□□□□ -0.91
USP11-208ENST00000480104 CH25HO95992 272 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 DBHP09172 617 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 JUNBP17275 347 aaPredicted RBP9.39□□□□□ -0.91
USP11-208ENST00000480104 PRKAR1BP31321 381 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 DNAJB13P59910 316 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 NFYCQ13952 458 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 CASP8Q14790 479 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 OR8G1Q15617 311 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 ZNF74Q16587 644 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 PCK2Q16822 640 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 UGT3A2Q3SY77 523 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 ANXA8L1Q5VT79 327 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 SLC25A47Q6Q0C1 308 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 ZNF329Q86UD4 541 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 CREG2Q8IUH2 290 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 MKXQ8IYA7 352 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 SLC26A10Q8NG04 563 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 OR5L1Q8NGL2 311 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 SLC38A5Q8WUX1 472 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 TMEM19Q96HH6 336 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 NUF2Q9BZD4 464 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 IFT52Q9Y366 437 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 LYVE1Q9Y5Y7 322 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 DNAH17Q9UFH2 4485 aa9.39□□□□□ -0.91
USP11-208ENST00000480104 IGLV1-36A0A0B4J1U3 117 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 A0A1W2PRG6 482 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 PSMB11A5LHX3 300 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 CCDC154A6NI56 674 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 FAM90A8PA6NJQ4 464 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 GLCEO94923 617 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 SCG5P05408 212 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 TCP1P17987 556 aaKnown RBP9.38□□□□□ -0.91
USP11-208ENST00000480104 AMY2BP19961 511 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 MSR1P21757 451 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 BGNP21810 368 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 CAV1Q03135 178 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 MICBQ29980 383 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 DEFB136Q30KP8 78 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 HDDC2Q7Z4H3 204 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 SYT9Q86SS6 491 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 HDAC2Q92769 488 aaKnown RBP9.38□□□□□ -0.91
USP11-208ENST00000480104 FOXRED1Q96CU9 486 aaPredicted RBP9.38□□□□□ -0.91
USP11-208ENST00000480104 SEH1LQ96EE3 360 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 EMC7Q9NPA0 242 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 SLCO1B3Q9NPD5 702 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 MRPL15Q9P015 296 aaKnown RBP9.38□□□□□ -0.91
USP11-208ENST00000480104 NDUFAF1Q9Y375 327 aa9.38□□□□□ -0.91
USP11-208ENST00000480104 A0A1W2PPL8 197 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 SH2D7A6NKC9 451 aaPredicted RBP9.37□□□□□ -0.91
USP11-208ENST00000480104 IFNA6P05013 189 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 MUC1P15941 1255 aaPredicted RBP9.37□□□□□ -0.91
USP11-208ENST00000480104 CA6P23280 308 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 CDKN2CP42773 168 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 TGM4P49221 684 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 DAP3P51398 398 aaKnown RBP9.37□□□□□ -0.91
USP11-208ENST00000480104 UGT2B15P54855 530 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 CDH12P55289 794 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 SCRN3Q0VDG4 424 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 SSX2Q16385 188 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 ABCA11PQ4W5N1 156 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 SPANXN4Q5MJ08 99 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 LDLRAD2Q5SZI1 272 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 ARMC4Q5T2S8 1044 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 TIFABQ6ZNK6 161 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 FOXL2NBQ6ZUU3 175 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 NANOGNBQ7Z5D8 188 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 ARMC8Q8IUR7 673 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 EGFL6Q8IUX8 553 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 ZNF695Q8IW36 515 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 RNFT2Q96EX2 444 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 ADAT1Q9BUB4 502 aaKnown RBP9.37□□□□□ -0.91
USP11-208ENST00000480104 HCAR1Q9BXC0 346 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 FUT8Q9BYC5 575 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 ELL3Q9HB65 397 aaPredicted RBP9.37□□□□□ -0.91
USP11-208ENST00000480104 VNN3Q9NY84 501 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 AURKCQ9UQB9 309 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 ANGPT4Q9Y264 503 aa9.37□□□□□ -0.91
USP11-208ENST00000480104 A0A0G2JPF8 293 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 GMNCA6NCL1 334 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 OR6C6A6NF89 314 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 HNRNPCL2B2RXH8 293 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 HNRNPCL3B7ZW38 293 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.36□□□□□ -0.91
USP11-208ENST00000480104 FMO6PO60774 539 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 HNRNPCL1O60812 293 aaKnown RBP9.36□□□□□ -0.91
USP11-208ENST00000480104 GRPP07492 148 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 HNRNPCL4P0DMR1 293 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 AZGP1P25311 298 aaKnown RBP9.36□□□□□ -0.91
USP11-208ENST00000480104 POU1F1P28069 291 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 GGT2P36268 569 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms