RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 OR6C74A6NCV1 312 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 CCT8L1PA6NM43 557 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 USP27XA6NNY8 438 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 E7ESA3 106 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 G3V3Y1 287 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 G3V4G9 280 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 SAP18O00422 153 aaKnown RBP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 BTN3A3O00478 584 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 EIF3HO15372 352 aaKnown RBP eCLIP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 RIPK2O43353 540 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 OR1I1O60431 355 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 CDC40O60508 579 aaKnown RBP eCLIP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 ZNF253O75346 499 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 HPP00738 406 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 MPC1LP0DKB6 136 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 CT45A10P0DMU9 189 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 ERGP11308 486 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 TBXA2RP21731 343 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 PRDX3P30048 256 aaKnown RBP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 SRP14P37108 136 aaKnown RBP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 PEX19P40855 299 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 BDKRB1P46663 353 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 ALDH3B2P48448 385 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 VEGFCP49767 419 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 PPT1P50897 306 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 KPNA2P52292 529 aaKnown RBP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 CRADDP78560 199 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 DR1Q01658 176 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 EWSR1Q01844 656 aaKnown RBP eCLIP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 ARHGAP19Q14CB8 494 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 TRIP13Q15645 432 aaPredicted RBP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 CYP51A1Q16850 503 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 TTLL9Q3SXZ7 439 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 DMRTC1Q5HYR2 192 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 SPANXN3Q5MJ09 141 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 CASC10Q5T4H9 136 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 ANKRD22Q5VYY1 191 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 STEAP4Q687X5 459 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 CYB5R2Q6BCY4 276 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 TTC23LQ6PF05 361 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 SPESP1Q6UW49 350 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 PDIK1LQ8N165 341 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 OR4E2Q8NGC2 313 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 OR5AR1Q8NGP9 310 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 OR2L8Q8NGY9 312 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 TRMT10AQ8TBZ6 339 aaKnown RBP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 VN1R17PQ8TDU5 208 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 RPL3LQ92901 407 aaKnown RBP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 SNF8Q96H20 258 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 FOPNLQ96NB1 174 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 TBX15Q96SF7 602 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 EBNA1BP2Q99848 306 aaKnown RBP4.06□□□□□ -1.76
UPF3A-205ENST00000479712 EHFQ9NZC4 300 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 GNG12Q9UBI6 72 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 KLHL21Q9UJP4 597 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 FBXO5Q9UKT4 447 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 PYCARDQ9ULZ3 195 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 MAB21L2Q9Y586 359 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 DNAH9Q9NYC9 4486 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 CSMD3Q7Z407 3707 aa4.06□□□□□ -1.76
UPF3A-205ENST00000479712 DNAJC13O75165 2243 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 OR6C65A6NJZ3 312 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 C3orf84H3BNL1 204 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 GFYI3L273 518 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 KIF2AO00139 706 aaPredicted RBP4.05□□□□□ -1.76
UPF3A-205ENST00000479712 PSIP1O75475 530 aaKnown RBP4.05□□□□□ -1.76
UPF3A-205ENST00000479712 RHBDL1O75783 438 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 CLDN9O95484 217 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 C1orf105O95561 183 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 CATP04040 527 aaKnown RBP4.05□□□□□ -1.76
UPF3A-205ENST00000479712 UMPSP11172 480 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 UGT2B7P16662 529 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 GABRA4P48169 554 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 RPL8P62917 257 aaKnown RBP4.05□□□□□ -1.76
UPF3A-205ENST00000479712 VLDLRP98155 873 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 CAV1Q03135 178 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 GRB7Q14451 532 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 SLC25A35Q3KQZ1 300 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 SLC22A6Q4U2R8 563 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 CTSL3PQ5NE16 218 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 SPATA46Q5T0L3 261 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 ZNF470Q6ECI4 717 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 ZNF600Q6ZNG1 722 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 SLC26A11Q86WA9 606 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 OTUD6BQ8N6M0 293 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 ANKFN1Q8N957 763 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 LKAAEAR1Q8TD35 194 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 ANKRD7Q92527 254 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 RNASE6Q93091 150 aaKnown RBP4.05□□□□□ -1.76
UPF3A-205ENST00000479712 CERS2Q96G23 380 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 ZNF285Q96NJ3 590 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 COL21A1Q96P44 957 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 ATOH8Q96SQ7 321 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 TM2D1Q9BX74 207 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 CUTCQ9NTM9 273 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 C20orf96Q9NUD7 363 aaPredicted RBP4.05□□□□□ -1.76
UPF3A-205ENST00000479712 ZNF581Q9P0T4 197 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 MAD1L1Q9Y6D9 718 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 EML6Q6ZMW3 1958 aa4.05□□□□□ -1.76
UPF3A-205ENST00000479712 FRAS1Q86XX4 4008 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms