RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ANOS1P23352 680 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 SLC15A1P46059 708 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 GRB2P62993 217 aaKnown RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 CCL8P80075 99 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 PSG7Q13046 419 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 GFOD2Q3B7J2 385 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 SNAI3Q3KNW1 292 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 KRTAP27-1Q3LI81 207 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 AADACL4Q5VUY2 407 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 PRSS57Q6UWY2 283 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 LRRN1Q6UXK5 716 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 SLC16A9Q7RTY1 509 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 C1orf174Q8IYL3 243 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 RFLNBQ8N5W9 214 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 MAPK1IP1LQ8NDC0 245 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 OR5L1Q8NGL2 311 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 OR8J1Q8NGP2 316 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 OR2AE1Q8NHA4 323 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 RNF133Q8WVZ7 376 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 CYGBQ8WWM9 190 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 UBE2FQ969M7 185 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 HRASLS5Q96KN8 279 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 COG8Q96MW5 612 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF582Q96NG8 517 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 TBX5Q99593 518 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ARPC5LQ9BPX5 153 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 C1QTNF5Q9BXJ0 243 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 MS4A5Q9H3V2 200 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 MSL2Q9HCI7 577 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 SMPD3Q9NY59 655 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 AASSQ9UDR5 926 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 TANC2Q9HCD6 1990 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ABCA1O95477 2261 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 IGHV4-30-2A0A087WSY4 118 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ZSCAN5BA6NJL1 495 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 C17orf100A8MU93 164 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 RNF223E7ERA6 249 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 LYNX1G3V0Z9 82 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 H3BSA7 217 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 J3QW42 95 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ENTPD6O75354 484 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 NCR1O76036 304 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 F12P00748 615 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 LYNX1P0DP58 116 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 CD99P14209 185 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 DAOP14920 347 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ATP6V1E1P36543 226 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 OPRL1P41146 370 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 MAGEB1P43366 347 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF81P51508 661 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 EFNB1P98172 346 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 MALLQ13021 153 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 TNK1Q13470 666 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 GGTLC2Q14390 218 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 MOGQ16653 247 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 OR2T2Q6IF00 324 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 DRAM2Q6UX65 266 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 MRPL21Q7Z2W9 205 aaKnown RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 KRT77Q7Z794 578 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 SLC35F2Q8IXU6 374 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 CIARTQ8N365 385 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF555Q8NEP9 628 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 FAM168AQ92567 244 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 KCNJ15Q99712 375 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 RHNO1Q9BSD3 238 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 YIPF3Q9GZM5 350 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 DCLRE1BQ9H816 532 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ADGRL4Q9HBW9 690 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 DECR2Q9NUI1 292 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 NKX1-2Q9UD57 310 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 PURGQ9UJV8 347 aaKnown RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 IKZF2Q9UKS7 526 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 COPS3Q9UNS2 423 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 LRP12Q9Y561 859 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 DYSFO75923 2080 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 LOC100130705A0A1B0GUX0 176 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 C5orf63A6NC05 138 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 HPXP02790 462 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 HTR1FP30939 366 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 OTX1P32242 354 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-215ENST00000478531 PDLIM4P50479 330 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 MMP15P51511 669 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF121P58317 390 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-215ENST00000478531 CXCR4P61073 352 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 GK2Q14410 553 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-215ENST00000478531 ZMAT1Q5H9K5 638 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 GLYATL3Q5SZD4 288 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 FBXW12Q6X9E4 464 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 USP51Q70EK9 711 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 FAM57BQ71RH2 274 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 PGAP1Q75T13 922 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF771Q7L3S4 317 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-215ENST00000478531 OR10H4Q8NGA5 316 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 OR10AD1Q8NGE0 317 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 NEU4Q8WWR8 484 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-215ENST00000478531 RFKQ969G6 155 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 PIMREGQ9BSJ6 248 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 SAP30LQ9HAJ7 183 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms