RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 LRRC74AQ0VAA2 488 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 PIN1Q13526 163 aaPredicted RBP5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 CNN3Q15417 329 aaKnown RBP5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 TMEM95Q3KNT9 176 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 C4orf46Q504U0 113 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 INTS11Q5TA45 600 aaKnown RBP5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 NCR3LG1Q68D85 454 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 C1orf94Q6P1W5 598 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 DHRS4L2Q6PKH6 230 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 UNQ9370/PRO34162Q6UXP9 181 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 ETV3LQ6ZN32 361 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 HIST3H2AQ7L7L0 130 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 HDDC2Q7Z4H3 204 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 SBSPONQ8IVN8 264 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 SLC30A8Q8IWU4 369 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 BOLLQ8N9W6 283 aaKnown RBP5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 BHLHE23Q8NDY6 225 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 HIST1H2ACQ93077 130 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 MYDGFQ969H8 173 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 MAL2Q969L2 176 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 ZIM3Q96PE6 472 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 OR52E6Q96RD3 313 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 FMO2Q99518 471 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 WACQ9BTA9 647 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 NUF2Q9BZD4 464 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 PRSS22Q9GZN4 317 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 METTL8Q9H825 291 aaKnown RBP5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 TPT1P8Q9HAU6 139 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 THUMPD1Q9NXG2 353 aaKnown RBP5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 PTTG3PQ9NZH4 202 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 SF3B6Q9Y3B4 125 aaKnown RBP5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 KIAA1109Q2LD37 5005 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 FRAS1Q86XX4 4008 aa5.89□□□□□ -1.47
SPTLC1-205ENST00000477888 A6NDX4 124 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 TMEM247A6NEH6 219 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 C12orf71A8MTZ7 269 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 MCIDASD6RGH6 385 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 COPEO14579 308 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 RFXANKO14593 260 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 PRODHO43272 600 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 SGCEO43556 437 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 DOK2O60496 412 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 LYPD3O95274 346 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 SERPINE1P05121 402 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 ALDOCP09972 364 aaKnown RBP5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 ZCCHC18P0CG32 403 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 MSR1P21757 451 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 BGNP21810 368 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 DAP3P51398 398 aaKnown RBP5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 UFM1P61960 85 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 HHATQ5VTY9 493 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 TEX36Q5VZQ5 186 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 ZNF613Q6PF04 617 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 ZNF572Q7Z3I7 529 aaPredicted RBP5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 GCSAMQ8N6F7 178 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 OR5L1Q8NGL2 311 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 BBS10Q8TAM1 723 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 RNF166Q96A37 237 aaPredicted RBP5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 VPS33AQ96AX1 596 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 PRR25Q96S07 402 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 CPPED1Q9BRF8 314 aaPredicted RBP5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 ZNF426Q9BUY5 554 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 STX18Q9P2W9 335 aaKnown RBP5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 PRPF19Q9UMS4 504 aaKnown RBP5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 TCF19Q9Y242 345 aa5.88□□□□□ -1.47
SPTLC1-205ENST00000477888 IGHV3OR15-7A0A075B7D8 119 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 GMNCA6NCL1 334 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 OR6C6A6NF89 314 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 M0R1W7 72 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 F2RL2O00254 374 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 RIPK2O43353 540 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 CHP2O43745 196 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 DNAJC8O75937 253 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 IGF2P01344 180 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 DBHP09172 617 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 TSPAN19P0C672 248 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 NR2C1P13056 603 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 KRT4P19013 534 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 AMY2BP19961 511 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 AQP2P41181 271 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 GUCA1AP43080 201 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 VDAC2P45880 294 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 TGM4P49221 684 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 THBS3P49746 956 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 RAB13P51153 203 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 NME5P56597 212 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 RGS8P57771 180 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 NCALDP61601 193 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 CD47Q08722 323 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 SCRN3Q0VDG4 424 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 RGNQ15493 299 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 GFOD2Q3B7J2 385 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 GTDC1Q4AE62 458 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 BEND6Q5SZJ8 279 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 TTC33Q6PID6 262 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 NANOGNBQ7Z5D8 188 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 CENPVQ7Z7K6 275 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 FAM216BQ8N7L0 139 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 LRRC8CQ8TDW0 803 aa5.87□□□□□ -1.47
SPTLC1-205ENST00000477888 IFT81Q8WYA0 676 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms