RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TLN2Q9Y4G6 2542 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 IGLV3-9A0A075B6K5 115 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 OR6C68A6NDL8 312 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 SLC22A31A6NKX4 558 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 A8MV72 311 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 RER1O15258 196 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 SGCEO43556 437 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 DOK2O60496 412 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 CDC14BO60729 498 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 CRLF1O75462 422 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 NCR1O76036 304 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 RENP00797 406 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 CDK1P06493 297 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 IGHV4-31P0DP07 118 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 DBTP11182 482 aaKnown RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF16P17020 682 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 GCH1P30793 250 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 HTR1FP30939 366 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 IL2RGP31785 369 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 HTR5AP47898 357 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 PPP1CBP62140 327 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 CCL8P80075 99 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF91Q05481 1191 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 SCRN3Q0VDG4 424 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 RAB40BQ12829 278 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 TSTQ16762 297 aaKnown RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF718Q3SXZ3 478 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 CCDC92Q53HC0 331 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 TMEM255AQ5JRV8 349 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 LCN1P1Q5VSP4 162 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 AADACL4Q5VUY2 407 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 CYB5R2Q6BCY4 276 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 DNM1P34Q6PK57 102 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 CORO6Q6QEF8 472 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 KCTD8Q6ZWB6 473 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 RFPL4BQ6ZWI9 263 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 VASH1Q7L8A9 365 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 SYT9Q86SS6 491 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 ADCK1Q86TW2 530 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 SPARTQ8N0X7 666 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 OR6V1Q8N148 313 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 KLF14Q8TD94 323 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 SNX33Q8WV41 574 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 FCGR1BQ92637 280 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 YIPF5Q969M3 257 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 MARS2Q96GW9 593 aaKnown RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 TMEM80Q96HE8 168 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 C4orf45Q96LM5 186 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 SNX18Q96RF0 628 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 SOX7Q9BT81 388 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 FAM192AQ9GZU8 254 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 POFUT1Q9H488 388 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 NARFLQ9H6Q4 476 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 HINT3Q9NQE9 182 aaKnown RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 FKBP14Q9NWM8 211 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 SLCO1C1Q9NYB5 712 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 PLEK2Q9NYT0 353 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 ERVK-18Q9QC07 812 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 WARS2Q9UGM6 360 aaKnown RBP7.07□□□□□ -1.28
HDAC6-221ENST00000477561 POLR1DQ9Y2S0 133 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 GRIP1Q9Y3R0 1128 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 PCDHGB1Q9Y5G3 927 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 HIVEP2P31629 2446 aa7.07□□□□□ -1.28
HDAC6-221ENST00000477561 IGLV1-36A0A0B4J1U3 117 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 LOC100289279A0A1B0GTE1 492 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 SMIM31A0A1B0GVY4 71 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 C17orf100A8MU93 164 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 TPD52L2O43399 206 aaKnown RBP7.06□□□□□ -1.28
HDAC6-221ENST00000477561 SPRY3O43610 288 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 LILRA1O75019 489 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 FADS2O95864 444 aaKnown RBP7.06□□□□□ -1.28
HDAC6-221ENST00000477561 ABHD16AO95870 558 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 IGHV3-13P01766 116 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 HLA-DQA2P01906 255 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 TFP02787 698 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 MT-ND2P03891 347 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 TFAP2AP05549 437 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 DBHP09172 617 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 GAAP10253 952 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 JUNBP17275 347 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-221ENST00000477561 GIFP27352 417 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 CRABP1P29762 137 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 PYCR1P32322 319 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 ATP6V1E1P36543 226 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 SLC15A1P46059 708 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 MTNR1AP48039 350 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 ALDH3B2P48448 385 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 LSM6P62312 80 aaKnown RBP7.06□□□□□ -1.28
HDAC6-221ENST00000477561 ST3GAL4Q11206 333 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 POU4F2Q12837 409 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 AQP6Q13520 282 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 RIN1Q13671 783 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 CRMP1Q14194 572 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 SLC35D3Q5M8T2 416 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 PLBD1Q6P4A8 553 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 MEPCEQ7L2J0 689 aaKnown RBP7.06□□□□□ -1.28
HDAC6-221ENST00000477561 GPR141Q7Z602 305 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 PRIMA1Q86XR5 153 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 CPOQ8IVL8 374 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms