RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 LOXL1Q08397 574 aaPredicted RBP15.06■□□□□ 0
PTPN7-209ENST00000477554 SMN1Q16637 294 aaKnown RBP15.06■□□□□ 0
PTPN7-209ENST00000477554 MALRD1Q5VYJ5 2156 aa15.06■□□□□ 0
PTPN7-209ENST00000477554 CFAP77Q6ZQR2 320 aa15.06■□□□□ 0
PTPN7-209ENST00000477554 BPIFB6Q8NFQ5 453 aa15.06■□□□□ 0
PTPN7-209ENST00000477554 SLC26A10Q8NG04 563 aa15.06■□□□□ 0
PTPN7-209ENST00000477554 C4orf45Q96LM5 186 aa15.06■□□□□ 0
PTPN7-209ENST00000477554 NR1H4Q96RI1 486 aaPredicted RBP15.06■□□□□ 0
PTPN7-209ENST00000477554 HAO2Q9NYQ3 351 aa15.06■□□□□ 0
PTPN7-209ENST00000477554 TPRKBQ9Y3C4 175 aa15.06■□□□□ 0
PTPN7-209ENST00000477554 PCDHGB5Q9Y5G0 923 aa15.06■□□□□ 0
PTPN7-209ENST00000477554 CACNG2Q9Y698 323 aa15.06■□□□□ 0
PTPN7-209ENST00000477554 OR6C6A6NF89 314 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 TVP23AA6NH52 213 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 SLC1A7O00341 560 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 SLC25A16P16260 332 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 RAD52P43351 418 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 MTNR1AP48039 350 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 KLF3P57682 345 aaPredicted RBP15.05■□□□□ -0
PTPN7-209ENST00000477554 DSCR9P59020 149 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 PCBD1P61457 104 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 PPP1CBP62140 327 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 CCL8P80075 99 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 POU4F2Q12837 409 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 AQP6Q13520 282 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 RIN1Q13671 783 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 KCNMB1Q16558 191 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 NKPD1Q17RQ9 610 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 LAIR2Q6ISS4 152 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 PRIMA1Q86XR5 153 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 OR6K6Q8NGW6 343 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 KLF14Q8TD94 323 aaPredicted RBP15.05■□□□□ -0
PTPN7-209ENST00000477554 UBASH3BQ8TF42 649 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 PIMREGQ9BSJ6 248 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 BCL2L14Q9BZR8 327 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 PLEK2Q9NYT0 353 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 MYRFQ9Y2G1 1151 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 STARD10Q9Y365 291 aa15.05■□□□□ -0
PTPN7-209ENST00000477554 LOC390937A0A1W2PQ73 354 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 IRGMA1A4Y4 181 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 CCDC182A6NF36 153 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 ZSCAN5BA6NJL1 495 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 VSTM5A8MXK1 200 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 CD5LO43866 347 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 LILRA1O75019 489 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 FAM20BO75063 409 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 DBTP11182 482 aaKnown RBP15.04■□□□□ -0
PTPN7-209ENST00000477554 ZNF16P17020 682 aaPredicted RBP15.04■□□□□ -0
PTPN7-209ENST00000477554 USF1P22415 310 aaPredicted RBP15.04■□□□□ -0
PTPN7-209ENST00000477554 CHN2P52757 468 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 LSM6P62312 80 aaKnown RBP15.04■□□□□ -0
PTPN7-209ENST00000477554 HIST1H3AP68431 136 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 KLHL22Q53GT1 634 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 HIST2H3PS2Q5TEC6 136 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 TMEM154Q6P9G4 183 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 HIST2H3AQ71DI3 136 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 SYT9Q86SS6 491 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 NAA40Q86UY6 237 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 NEU4Q8WWR8 484 aaPredicted RBP15.04■□□□□ -0
PTPN7-209ENST00000477554 YAE1D1Q9NRH1 226 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 TREM2Q9NZC2 230 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 GRIP1Q9Y3R0 1128 aa15.04■□□□□ -0
PTPN7-209ENST00000477554 C5orf63A6NC05 138 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 EFCAB10A6NFE3 127 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 C17orf100A8MU93 164 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 CDC14BO60729 498 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 TNFAIP8O95379 198 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 ABHD16AO95870 558 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 IGHV3-13P01766 116 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 HLA-DQA2P01906 255 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 CRHBPP24387 322 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 GSTT1P30711 240 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 ATP6V1E1P36543 226 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 MMP15P51511 669 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 ZNF91Q05481 1191 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 SCRN3Q0VDG4 424 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 TSTQ16762 297 aaKnown RBP15.03■□□□□ -0
PTPN7-209ENST00000477554 LINC01590Q5TEZ4 76 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 SLC18B1Q6NT16 456 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 ALDH16A1Q8IZ83 802 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 ZNF540Q8NDQ6 660 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 OR10S1Q8NGN2 331 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 OR1F12Q8NHA8 337 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 RNFT2Q96EX2 444 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 NARFLQ9H6Q4 476 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 WDR76Q9H967 626 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 MSL2Q9HCI7 577 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 AMBNQ9NP70 447 aa15.03■□□□□ -0
PTPN7-209ENST00000477554 PNRC2Q9NPJ4 139 aaKnown RBP15.03■□□□□ -0
PTPN7-209ENST00000477554 MRPS18AQ9NVS2 196 aaKnown RBP15.03■□□□□ -0
PTPN7-209ENST00000477554 CNOT2Q9NZN8 540 aaKnown RBP15.03■□□□□ -0
PTPN7-209ENST00000477554 XPNPEP2O43895 674 aa15.02■□□□□ -0
PTPN7-209ENST00000477554 ICMTO60725 284 aa15.02■□□□□ -0
PTPN7-209ENST00000477554 RP2O75695 350 aa15.02■□□□□ -0
PTPN7-209ENST00000477554 CSF3P09919 207 aa15.02■□□□□ -0
PTPN7-209ENST00000477554 GIFP27352 417 aa15.02■□□□□ -0
PTPN7-209ENST00000477554 SLC15A1P46059 708 aa15.02■□□□□ -0
PTPN7-209ENST00000477554 RAB40BQ12829 278 aa15.02■□□□□ -0
PTPN7-209ENST00000477554 PSG7Q13046 419 aa15.02■□□□□ -0
PTPN7-209ENST00000477554 HLXQ14774 488 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms