RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-211	ENST00000476855	LRRC46	Q96FV0	321 aa		13.76	□□□□□ -0.21
PSMD4-211	ENST00000476855	COG8	Q96MW5	612 aa		13.76	□□□□□ -0.21
PSMD4-211	ENST00000476855	OPALIN	Q96PE5	141 aa		13.76	□□□□□ -0.21
PSMD4-211	ENST00000476855	MGLL	Q99685	303 aa		13.76	□□□□□ -0.21
PSMD4-211	ENST00000476855	FAM206A	Q9NX38	181 aa		13.76	□□□□□ -0.21
PSMD4-211	ENST00000476855	SCOC	Q9UIL1	159 aa		13.76	□□□□□ -0.21
PSMD4-211	ENST00000476855	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD4-211	ENST00000476855	IGHV1-18	A0A0C4DH31	117 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	IQCM	A0A1B0GVH7	501 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855		M0R135	149 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	OGG1	O15527	345 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	RPP14	O95059	124 aa	Known RBP	13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	STOM	P27105	288 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	HSD11B1	P28845	292 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	MMP16	P51512	607 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	PRKX	P51817	358 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	GBX2	P52951	348 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	NANOS3	P60323	173 aa	Known RBP	13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	PLP2	Q04941	152 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	MLLT11	Q13015	90 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	MRPL28	Q13084	256 aa	Known RBP	13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	TAF13	Q15543	124 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	MUCL1	Q96DR8	90 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	ZNF799	Q96GE5	643 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	WFIKKN1	Q96NZ8	548 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	DOK1	Q99704	481 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	TMUB1	Q9BVT8	246 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	C1QTNF6	Q9BXI9	259 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	MOV10	Q9HCE1	1003 aa	Known RBP	13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	VCX3A	Q9NNX9	186 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	TRIM36	Q9NQ86	728 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	G6PC2	Q9NQR9	355 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855		R4GMQ9	66 aa		13.75	□□□□□ -0.21
PSMD4-211	ENST00000476855	CAD	P27708	2225 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855		F5H5K5	113 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	CECR9	P0C854	216 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	KIR3DL2	P43630	455 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	CX3CR1	P49238	355 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	NR1H2	P55055	460 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	ZNF121	P58317	390 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	TAS2R43	P59537	309 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	GALK2	Q01415	458 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	ALKBH1	Q13686	389 aa	Known RBP	13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	CDK5R1	Q15078	307 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	TIGD6	Q17RP2	521 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	CCDC58	Q4VC31	144 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	DMKN	Q6E0U4	476 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	DRAM2	Q6UX65	266 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	SSX8	Q7RTT4	187 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	NAA40	Q86UY6	237 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	CATSPERD	Q86XM0	798 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	PRSS35	Q8N3Z0	413 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	ZNF283	Q8N7M2	679 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	ZFP41	Q8N8Y5	198 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	SLC30A7	Q8NEW0	376 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	IL17RD	Q8NFM7	739 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	OR2G2	Q8NGZ5	317 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	HAVCR2	Q8TDQ0	301 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	SPTSSA	Q969W0	71 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	C4orf45	Q96LM5	186 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	DNHD1	Q96M86	4753 aa		13.74	□□□□□ -0.21
PSMD4-211	ENST00000476855	C5orf63	A6NC05	138 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	LOC110117498-PIK3R3	F6TDL0	507 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	CCL2	P13500	99 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	CPE	P16870	476 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	PSMB9	P28065	219 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	APLNR	P35414	380 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	GDI2	P50395	445 aa	Known RBP	13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	ZNF83	P51522	516 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	TPTE	P56180	551 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	TPBG	Q13641	420 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	SNTB1	Q13884	538 aa	Known RBP	13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	SSX1	Q16384	188 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	ARMCX4	Q5H9R4	360 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	WDR38	Q5JTN6	314 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	RPL22L1	Q6P5R6	122 aa	Known RBP	13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	COLCA1	Q6ZS62	124 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	PPP1R14A	Q96A00	147 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	DCLRE1C	Q96SD1	692 aa	Known RBP	13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	FRRS1L	Q9P0K9	344 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	ZNF319	Q9P2F9	582 aa		13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	NUFIP1	Q9UHK0	495 aa	Known RBP	13.73	□□□□□ -0.21
PSMD4-211	ENST00000476855	TMEM269	A0A1B0GVZ9	245 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	FAM221A	A4D161	298 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	C5orf49	A4QMS7	147 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	ACOD1	A6NK06	481 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	OR4C45	A6NMZ5	311 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	PLPP2	O43688	288 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	ICMT	O60725	284 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	APOC1	P02654	83 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	CD1A	P06126	327 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	HSMCR30	P0CW71	290 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	SLC2A1	P11166	492 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	ZNF35	P13682	527 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	TGFBR2	P37173	567 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	LIPA	P38571	399 aa		13.72	□□□□□ -0.21
PSMD4-211	ENST00000476855	WNT5A	P41221	380 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms