RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 TMEM106BQ9NUM4 274 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 TMEM100Q9NV29 134 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 TREM2Q9NZC2 230 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 POMPQ9Y244 141 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 NPTNQ9Y639 398 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 COMMD3-BMI1R4GMX3 469 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 FBN3Q75N90 2809 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 YLPM1P49750 1951 aaKnown RBP8.66□□□□□ -1.02
CCM2-208ENST00000476594 A0A0G2JMP0 313 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 A0A0X1KG70 313 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 TCRBV3S1A0A5B6 114 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 TVP23AA6NH52 213 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 PRODHO43272 600 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 XRCC2O43543 280 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 CIB2O75838 187 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 GLCEO94923 617 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 FCGR1AP12314 374 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 OSMP13725 252 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 CFL1P23528 166 aaKnown RBP8.66□□□□□ -1.02
CCM2-208ENST00000476594 CPT2P23786 658 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 IL2RGP31785 369 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 BNIP1Q12981 228 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 SNCBQ16143 134 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 TEX30Q5JUR7 227 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 LIPNQ5VXI9 398 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 OTPQ5XKR4 325 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 OR2T2Q6IF00 324 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 COLCA1Q6ZS62 124 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 RHOUQ7L0Q8 258 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 OR5AS1Q8N127 324 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 ZNF283Q8N7M2 679 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 CELF2-AS1Q8N7Q2 184 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 OR4M2Q8NGB6 313 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 OR6N2Q8NGY6 317 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 OR4Q3Q8NH05 313 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 ERGIC1Q969X5 290 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 SLC7A6OSQ96CW6 309 aaPredicted RBP8.66□□□□□ -1.02
CCM2-208ENST00000476594 SLAMF6Q96DU3 332 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 OR2V2Q96R30 315 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 INTS14Q96SY0 518 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 KCNJ15Q99712 375 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 CENPMQ9NSP4 180 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 HIF1ANQ9NWT6 349 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 MRPL22Q9NWU5 206 aaKnown RBP8.66□□□□□ -1.02
CCM2-208ENST00000476594 VNN3Q9NY84 501 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 UBAP1Q9NZ09 502 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 MALRD1Q5VYJ5 2156 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 ATRQ13535 2644 aa8.66□□□□□ -1.02
CCM2-208ENST00000476594 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.65□□□□□ -1.02
CCM2-208ENST00000476594 GGT3PA6NGU5 568 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 KIAA1324LA8MWY0 1029 aaPredicted RBP8.65□□□□□ -1.02
CCM2-208ENST00000476594 J3QLI3 93 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 ZNF593O00488 134 aaPredicted RBP8.65□□□□□ -1.02
CCM2-208ENST00000476594 GSC2O15499 205 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 FOXH1O75593 365 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 PNPP00491 289 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 IGHV2-5P01817 119 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 GYPBP06028 91 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 GSTT1P30711 240 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 DDOSTP39656 456 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 LMO4P61968 165 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 RPS7P62081 194 aaKnown RBP8.65□□□□□ -1.02
CCM2-208ENST00000476594 BTG1P62324 171 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 EIF2B1Q14232 305 aaKnown RBP8.65□□□□□ -1.02
CCM2-208ENST00000476594 HLXQ14774 488 aaPredicted RBP8.65□□□□□ -1.02
CCM2-208ENST00000476594 PCK2Q16822 640 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 KRTAP27-1Q3LI81 207 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 TMEM155Q4W5P6 130 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 SLC35D3Q5M8T2 416 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 LCN1P1Q5VSP4 162 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 C1orf146Q5VVC0 180 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.65□□□□□ -1.02
CCM2-208ENST00000476594 ERI1Q8IV48 349 aaKnown RBP8.65□□□□□ -1.02
CCM2-208ENST00000476594 FTMTQ8N4E7 242 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 ZNF454Q8N9F8 522 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 SPERTQ8NA61 448 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 PAPD5Q8NDF8 572 aaKnown RBP8.65□□□□□ -1.02
CCM2-208ENST00000476594 BHLHE23Q8NDY6 225 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 OR51L1Q8NGJ5 315 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 OR11L1Q8NGX0 322 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 ITLN1Q8WWA0 313 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 SLCO4A1Q96BD0 722 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 MAP6Q96JE9 813 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 DDOQ99489 341 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 SLC30A2Q9BRI3 323 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 SOX7Q9BT81 388 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 NMNAT2Q9BZQ4 307 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 POFUT1Q9H488 388 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 LPAR2Q9HBW0 351 aa8.65□□□□□ -1.02
CCM2-208ENST00000476594 RNF212BA8MTL3 300 aa8.64□□□□□ -1.03
CCM2-208ENST00000476594 FAM157AC9JC47 383 aa8.64□□□□□ -1.03
CCM2-208ENST00000476594 GMDSO60547 372 aa8.64□□□□□ -1.03
CCM2-208ENST00000476594 SBK2P0C263 348 aa8.64□□□□□ -1.03
CCM2-208ENST00000476594 FASP25445 335 aa8.64□□□□□ -1.03
CCM2-208ENST00000476594 OTX1P32242 354 aaPredicted RBP8.64□□□□□ -1.03
CCM2-208ENST00000476594 MDH2P40926 338 aaKnown RBP8.64□□□□□ -1.03
CCM2-208ENST00000476594 ESRRGP62508 458 aa8.64□□□□□ -1.03
CCM2-208ENST00000476594 GK2Q14410 553 aaPredicted RBP8.64□□□□□ -1.03
CCM2-208ENST00000476594 GINS1Q14691 196 aa8.64□□□□□ -1.03
CCM2-208ENST00000476594 OR8G1Q15617 311 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms