RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CDK5R2Q13319 367 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 GINS1Q14691 196 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 KRTAP27-1Q3LI81 207 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 SHQ1Q6PI26 577 aaKnown RBP13.72□□□□□ -0.21
COL1A1-205ENST00000476387 DCXRQ7Z4W1 244 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 OR5AS1Q8N127 324 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 TEX29Q8N6K0 151 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 ZNF511Q8NB15 262 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 ZNRF4Q8WWF5 429 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 CCL17Q92583 94 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 RAB39BQ96DA2 213 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 NRBF2Q96F24 287 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 ZNF799Q96GE5 643 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 MAP6Q96JE9 813 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 COPS4Q9BT78 406 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 HCAR1Q9BXC0 346 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 C1QTNF5Q9BXJ0 243 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 ZNF665Q9H7R5 613 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 WDR76Q9H967 626 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 PNRC2Q9NPJ4 139 aaKnown RBP13.72□□□□□ -0.21
COL1A1-205ENST00000476387 FAM183AA6NL82 134 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 ZNF593O00488 134 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-205ENST00000476387 SURF4O15260 269 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 HMGN1P05114 100 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 TNFRSF1AP19438 455 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 PRKACGP22612 351 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 MVKQ03426 396 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 TAF13Q15543 124 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 AVPI1Q5T686 147 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 OR2T2Q6IF00 324 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 ACSM5Q6NUN0 579 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 PEG10Q86TG7 708 aaKnown RBP13.71□□□□□ -0.21
COL1A1-205ENST00000476387 RAB1CQ92928 201 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 ZNF582Q96NG8 517 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-205ENST00000476387 INTS14Q96SY0 518 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 MED20Q9H944 212 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 LPAR2Q9HBW0 351 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 DDX28Q9NUL7 540 aaKnown RBP13.71□□□□□ -0.21
COL1A1-205ENST00000476387 CACNG2Q9Y698 323 aa13.71□□□□□ -0.21
COL1A1-205ENST00000476387 ZNF878C9JN71 531 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 PRR23D1E9PI22 279 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-205ENST00000476387 PRR23D2P0DMB1 279 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-205ENST00000476387 SELEP16581 610 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 GSTT1P30711 240 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 RSPO1Q2MKA7 263 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-205ENST00000476387 TEX30Q5JUR7 227 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 Q6ZR03 302 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 COLCA1Q6ZS62 124 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 ERI1Q8IV48 349 aaKnown RBP13.7□□□□□ -0.22
COL1A1-205ENST00000476387 BHLHE23Q8NDY6 225 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 OR10S1Q8NGN2 331 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 OR6N2Q8NGY6 317 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 OR5K1Q8NHB7 308 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 SLAMF6Q96DU3 332 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 OR51V1Q9H2C8 321 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 METTL17Q9H7H0 456 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-205ENST00000476387 PAPOLBQ9NRJ5 636 aaKnown RBP13.7□□□□□ -0.22
COL1A1-205ENST00000476387 CENPMQ9NSP4 180 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 WIPI2Q9Y4P8 454 aa13.7□□□□□ -0.22
COL1A1-205ENST00000476387 WNK2Q9Y3S1 2297 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 ISPDA4D126 451 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 GLCEO94923 617 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 PNPP00491 289 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 PSKH1P11801 424 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 FCGR1AP12314 374 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 FASP25445 335 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 SLC15A1P46059 708 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 EIF2B1Q14232 305 aaKnown RBP13.69□□□□□ -0.22
COL1A1-205ENST00000476387 ATP6AP1Q15904 470 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 PCK2Q16822 640 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 LINC01590Q5TEZ4 76 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 PLBD1Q6P4A8 553 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 DRAM2Q6UX65 266 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 MRPL21Q7Z2W9 205 aaKnown RBP13.69□□□□□ -0.22
COL1A1-205ENST00000476387 OR8G5Q8NG78 346 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 OR13G1Q8NGZ3 307 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 ZFAND2BQ8WV99 257 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 UTP4Q969X6 686 aaKnown RBP13.69□□□□□ -0.22
COL1A1-205ENST00000476387 NTN4Q9HB63 628 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 SLC25A19Q9HC21 320 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 G6PC2Q9NQR9 355 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 IL19Q9UHD0 177 aa13.69□□□□□ -0.22
COL1A1-205ENST00000476387 IQCF6A8MYZ5 107 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 IGHV2-5P01817 119 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 HSD11B1P28845 292 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-205ENST00000476387 PRKXP51817 358 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 GRB2P62993 217 aaKnown RBP13.68□□□□□ -0.22
COL1A1-205ENST00000476387 CDK5Q00535 292 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 GK2Q14410 553 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-205ENST00000476387 KLHL12Q53G59 568 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 FAHD2BQ6P2I3 314 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-205ENST00000476387 FAHD1Q6P587 224 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 PGAP1Q75T13 922 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 SPATC1Q76KD6 591 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 SHFQ7M4L6 423 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 NAA40Q86UY6 237 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 OR10AD1Q8NGE0 317 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms