RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 FZD5Q13467 585 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 PPP1R1AQ13522 171 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 TRAM1Q15629 374 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 WBP2NLQ6ICG8 309 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 OGFOD3Q6PK18 319 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 SLC16A13Q7RTY0 426 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 YRDCQ86U90 279 aaKnown RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 NAA40Q86UY6 237 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 OR11G2Q8NGC1 345 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 OR1S2Q8NGQ3 325 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 OR5H2Q8NGV7 314 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 SMIM4Q8WVI0 70 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 PIGCQ92535 297 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 GNRHR2Q96P88 292 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 ALKBH3Q96Q83 286 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 TSPAN32Q96QS1 320 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 ARHGDIGQ99819 225 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 NUDT9Q9BW91 350 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 TEX101Q9BY14 249 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF160Q9HCG1 818 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 ASH1LQ9NR48 2969 aaKnown RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 GPR173Q9NS66 373 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 ABRACLQ9P1F3 81 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 A3GALT2U3KPV4 340 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF462Q96JM2 2506 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 PATJQ8NI35 1801 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 MED13Q9UHV7 2174 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 OR5K3A6NET4 321 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 BCAT2O15382 392 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF93P35789 620 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 H2BFSP57053 126 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 HLXQ14774 488 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 PAPD4Q6PIY7 484 aaKnown RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 DND1Q8IYX4 353 aaKnown RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 APCDD1LQ8NCL9 501 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 BAHD1Q8TBE0 780 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 RHBDD1Q8TEB9 315 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 FOXRED1Q96CU9 486 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-204ENST00000476379 TIMP4Q99727 224 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 RTN4RQ9BZR6 473 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 ZFP64Q9NPA5 681 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 LUZP4Q9P127 313 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 KCNS2Q9ULS6 477 aa4.48□□□□□ -1.69
CCDC39-204ENST00000476379 MTCL1Q9Y4B5 1905 aaKnown RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 WNK1Q9H4A3 2382 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SETD2Q9BYW2 2564 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 GGT3PA6NGU5 568 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 NPIPA2E9PIF3 369 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 NPIPA3F8WFD2 350 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 GABARAPH6UMI1 98 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ATXN7O15265 892 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SGCEO43556 437 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ADRA2CP18825 462 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 GLRA1P23415 457 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 FGF9P31371 208 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 RAB38P57729 211 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ZP1P60852 638 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF33BQ06732 778 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 USF2Q15853 346 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 MESTQ5EB52 335 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 PWWP2BQ6NUJ5 590 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 RNF144BQ7Z419 303 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 C5orf24Q7Z6I8 188 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 OR2L13Q8N349 312 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 PNLDC1Q8NA58 520 aaKnown RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ADAD2Q8NCV1 583 aaKnown RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SECTM1Q8WVN6 248 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 DAZLQ92904 295 aaKnown RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 GIMAP5Q96F15 307 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SDSLQ96GA7 329 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 MED30Q96HR3 178 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 LRRC61Q9BV99 259 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 HDAC8Q9BY41 377 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 PPA2Q9H2U2 334 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 AKIRIN1Q9H9L7 192 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF304Q9HCX3 659 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 GPR84Q9NQS5 396 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 STEAP1Q9UHE8 339 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 CYB5R1Q9UHQ9 305 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 OR52A1Q9UKL2 312 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 FOXJ3Q9UPW0 622 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 LRP12Q9Y561 859 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 OR2J2O76002 312 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SLC35E2P0CK97 266 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 FOLR1P15328 257 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 RCC1P18754 421 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 KLK2P20151 261 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 CAMLGP49069 296 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 RPS18P62269 152 aaKnown RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ELOCQ15369 112 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 IGFBP7Q16270 282 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 PLA1AQ53H76 456 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 C1orf140Q5VVS0 124 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 LYSMD4Q5XG99 296 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 CD276Q5ZPR3 534 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 GUSBP11Q6P575 273 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM65Q6PI78 240 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 GPR137CQ8N3F9 429 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms