RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 AQP4P55087 323 aa25.33■■□□□ 1.65
HOXB3-208ENST00000476342 MALLQ13021 153 aa25.33■■□□□ 1.65
HOXB3-208ENST00000476342 SNX33Q8WV41 574 aa25.33■■□□□ 1.65
HOXB3-208ENST00000476342 VRK1Q99986 396 aaPredicted RBP25.33■■□□□ 1.65
HOXB3-208ENST00000476342 MS4A5Q9H3V2 200 aa25.33■■□□□ 1.65
HOXB3-208ENST00000476342 POFUT1Q9H488 388 aa25.33■■□□□ 1.65
HOXB3-208ENST00000476342 PTTG3PQ9NZH4 202 aa25.33■■□□□ 1.65
HOXB3-208ENST00000476342 LRP12Q9Y561 859 aa25.33■■□□□ 1.65
HOXB3-208ENST00000476342 APOL3O95236 402 aa25.32■■□□□ 1.64
HOXB3-208ENST00000476342 MT-ND5P03915 603 aa25.32■■□□□ 1.64
HOXB3-208ENST00000476342 ROM1Q03395 351 aa25.32■■□□□ 1.64
HOXB3-208ENST00000476342 ZNF322Q6U7Q0 402 aaPredicted RBP25.32■■□□□ 1.64
HOXB3-208ENST00000476342 ZNF679Q8IYX0 411 aa25.32■■□□□ 1.64
HOXB3-208ENST00000476342 C8orf59Q8N0T1 100 aaPredicted RBP25.32■■□□□ 1.64
HOXB3-208ENST00000476342 OR10H4Q8NGA5 316 aa25.32■■□□□ 1.64
HOXB3-208ENST00000476342 APH1BQ8WW43 257 aa25.32■■□□□ 1.64
HOXB3-208ENST00000476342 OR8B4Q96RC9 309 aa25.32■■□□□ 1.64
HOXB3-208ENST00000476342 CXXC4Q9H2H0 198 aa25.32■■□□□ 1.64
HOXB3-208ENST00000476342 BARX1Q9HBU1 254 aaPredicted RBP25.32■■□□□ 1.64
HOXB3-208ENST00000476342 IKZF2Q9UKS7 526 aa25.32■■□□□ 1.64
HOXB3-208ENST00000476342 ZNF254O75437 659 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 ANXA2P07355 339 aaKnown RBP25.31■■□□□ 1.64
HOXB3-208ENST00000476342 ERCC1P07992 297 aaPredicted RBP25.31■■□□□ 1.64
HOXB3-208ENST00000476342 ALDH3B1P43353 468 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 ZNF91Q05481 1191 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 EGR3Q06889 387 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 FBXW12Q6X9E4 464 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 TBX5Q99593 518 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 TTTY10Q9BZA0 68 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 RAB1BQ9H0U4 201 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 RPL36Q9Y3U8 105 aaKnown RBP25.31■■□□□ 1.64
HOXB3-208ENST00000476342 PCDHGB1Q9Y5G3 927 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 CREBBPQ92793 2442 aa25.31■■□□□ 1.64
HOXB3-208ENST00000476342 ADRA2AP08913 450 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 SLC2A1P11166 492 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 DBTP11182 482 aaKnown RBP25.3■■□□□ 1.64
HOXB3-208ENST00000476342 RAC2P15153 192 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 ACTC1P68032 377 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 ACTA1P68133 377 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 PSG7Q13046 419 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 RFLNBQ8N5W9 214 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 TFAP2CQ92754 450 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 CMBLQ96DG6 245 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 CGGBP1Q9UFW8 167 aaPredicted RBP25.3■■□□□ 1.64
HOXB3-208ENST00000476342 N6AMT1Q9Y5N5 214 aa25.3■■□□□ 1.64
HOXB3-208ENST00000476342 PLSCR5A0PG75 271 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 PSMD9O00233 223 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 TIMM8AO60220 97 aaPredicted RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 WBP4O75554 376 aaKnown RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 RIDAP52758 137 aaKnown RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 ZNF121P58317 390 aaPredicted RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 PSMA6P60900 246 aaKnown RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 ISL1P61371 349 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 SNAI3Q3KNW1 292 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 CNIH3Q8TBE1 160 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 HAVCR1Q96D42 359 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 AKAP9Q99996 3911 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 PRRC2AP48634 2157 aaKnown RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 A0A1W2PQL4 384 aaPredicted RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 GNAO1P09471 354 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 KITLGP21583 273 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 DCTDP32321 178 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 LIPAP38571 399 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 HLXQ14774 488 aaPredicted RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 ALKBH6Q3KRA9 238 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 SHEQ5VZ18 495 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 OR52H1Q8NGJ2 320 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 AMBNQ9NP70 447 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 CYSLTR2Q9NS75 346 aa25.29■■□□□ 1.64
HOXB3-208ENST00000476342 PURGQ9UJV8 347 aaKnown RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 EXOGQ9Y2C4 368 aaKnown RBP25.29■■□□□ 1.64
HOXB3-208ENST00000476342 TBX1O43435 398 aa25.28■■□□□ 1.64
HOXB3-208ENST00000476342 XRCC2O43543 280 aa25.28■■□□□ 1.64
HOXB3-208ENST00000476342 IGHV4-39P01824 125 aa25.28■■□□□ 1.64
HOXB3-208ENST00000476342 RAB40BQ12829 278 aa25.28■■□□□ 1.64
HOXB3-208ENST00000476342 GK2Q14410 553 aaPredicted RBP25.28■■□□□ 1.64
HOXB3-208ENST00000476342 SORCS2Q96PQ0 1159 aa25.28■■□□□ 1.64
HOXB3-208ENST00000476342 OPA3Q9H6K4 179 aa25.28■■□□□ 1.64
HOXB3-208ENST00000476342 BRD7Q9NPI1 651 aa25.28■■□□□ 1.64
HOXB3-208ENST00000476342 PRR32B1ATL7 298 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 NDUFS7O75251 213 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 KRT8P05787 483 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 SELEP16581 610 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 HSPA13P48723 471 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 EFNA4P52798 201 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 ZNF829Q3KNS6 432 aaPredicted RBP25.27■■□□□ 1.64
HOXB3-208ENST00000476342 ZMAT1Q5H9K5 638 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 PRSS57Q6UWY2 283 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 IZUMO2Q6UXV1 221 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 USP51Q70EK9 711 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 FAM57BQ71RH2 274 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 PGAP1Q75T13 922 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 PRSS45Q7RTY3 260 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 MRPL21Q7Z2W9 205 aaKnown RBP25.27■■□□□ 1.64
HOXB3-208ENST00000476342 LGALS12Q96DT0 336 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 PGAM5Q96HS1 289 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 OR10A2Q9H208 303 aa25.27■■□□□ 1.64
HOXB3-208ENST00000476342 FADS2O95864 444 aaKnown RBP25.26■■□□□ 1.63
HOXB3-208ENST00000476342 NAT2P11245 290 aa25.26■■□□□ 1.63
HOXB3-208ENST00000476342 VHLP40337 213 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms