RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ARAP2Q8WZ64 1704 aa2.88□□□□□ -1.95
PTCD3-211ENST00000476215 OTOFQ9HC10 1997 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 TMEM150BA6NC51 233 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 MRPS12O15235 138 aaKnown RBP2.87□□□□□ -1.95
PTCD3-211ENST00000476215 RNF113AO15541 343 aaKnown RBP2.87□□□□□ -1.95
PTCD3-211ENST00000476215 PALMO75781 387 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 HLA-DPB1P04440 258 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 BCHEP06276 602 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 CRYGBP07316 175 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 PMELP40967 661 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 ACLYP53396 1101 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 STK11Q15831 433 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 ABCA11PQ4W5N1 156 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 C5orf47Q569G3 176 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 MFSD14CQ5VZR4 134 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 KIFAP3Q92845 792 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 C11orf49Q9H6J7 331 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 SAMSN1Q9NSI8 373 aaKnown RBP2.87□□□□□ -1.95
PTCD3-211ENST00000476215 UVRAGQ9P2Y5 699 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 DOCK9Q9BZ29 2069 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 LAMB1P07942 1786 aa2.87□□□□□ -1.95
PTCD3-211ENST00000476215 NUP214P35658 2090 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-211ENST00000476215 IGHV5-10-1A0A0J9YXX1 117 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 GLYATL1P3A0A0U1RQE8 302 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 HEATR9A2RTY3 570 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 FAM47DPA6NHR8 397 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 RAB29O14966 203 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 FLOT1O75955 427 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 CLPXO76031 633 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 SRP72O76094 671 aaKnown RBP2.86□□□□□ -1.95
PTCD3-211ENST00000476215 TSPAN13O95857 204 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 IGHDP01880 384 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 ANXA5P08758 320 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 CISD3P0C7P0 127 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 TROVE2P10155 538 aaKnown RBP eCLIP2.86□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF250P15622 560 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF24P17028 368 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 PSMC3P17980 439 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 AQP2P41181 271 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 TMED10P49755 219 aaKnown RBP2.86□□□□□ -1.95
PTCD3-211ENST00000476215 ARG2P78540 354 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 RGNQ15493 299 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 LRRC26Q2I0M4 334 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 SASS6Q6UVJ0 657 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 Q6ZSR3 168 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 MMAAQ8IVH4 418 aaKnown RBP2.86□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF561Q8N587 486 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 OR56B2PQ8NGI1 322 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 OR5B3Q8NH48 314 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 CNDP1Q96KN2 507 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 SLC29A1Q99808 456 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 CENPKQ9BS16 269 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 PARP12Q9H0J9 701 aaKnown RBP2.86□□□□□ -1.95
PTCD3-211ENST00000476215 NTN4Q9HB63 628 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 ST3GAL6Q9Y274 331 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 VCANP13611 3396 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 IGSF9BQ9UPX0 1349 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 UNC80Q8N2C7 3258 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 ZSWIM8A7E2V4 1837 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 PHIPQ8WWQ0 1821 aa2.86□□□□□ -1.95
PTCD3-211ENST00000476215 BDP1A6H8Y1 2624 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 IGKV6-21A0A0C4DH24 114 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 A0A1W2PQ67 120 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 XKRY2A2RUG3 117 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 LRRIQ3A6PVS8 624 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-211ENST00000476215 BET1O15155 118 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 CIB2O75838 187 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 IGHV1-8P0DP01 117 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 FOXN2P32314 431 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 NAA10P41227 235 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF138P52744 262 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 ESRRGP62508 458 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 ADARB1P78563 741 aaKnown RBP2.85□□□□□ -1.95
PTCD3-211ENST00000476215 SLC25A11Q02978 314 aaKnown RBP2.85□□□□□ -1.95
PTCD3-211ENST00000476215 MXD1Q05195 221 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 SYCNQ0VAF6 134 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 MOBPQ13875 183 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 THEM4Q5T1C6 240 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 FBXW9Q5XUX1 488 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 SLC8B1Q6J4K2 584 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 CEMP1Q6PRD7 247 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-211ENST00000476215 ARL9Q6T311 187 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 RIMKLAQ8IXN7 391 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 PRSS58Q8IYP2 241 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 FBXL13Q8NEE6 735 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 NOXO1Q8NFA2 376 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 OR10J6PQ8NGY7 276 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 ABHD3Q8WU67 409 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 C12orf10Q9HB07 376 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 HMG20AQ9NP66 347 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 ZNF355PQ9NSJ1 428 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 FAM49BQ9NUQ9 324 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 ZNRD1Q9P1U0 126 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 OPN4Q9UHM6 478 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 TMED5Q9Y3A6 229 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 IKBKGQ9Y6K9 419 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 PRUNE2Q8WUY3 3088 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 CABIN1Q9Y6J0 2220 aa2.85□□□□□ -1.95
PTCD3-211ENST00000476215 CHD9Q3L8U1 2897 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms