RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580		A0A1B0GWJ7	208 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	CLDN25	C9JDP6	229 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	PRR23D1	E9PI22	279 aa	Predicted RBP	14	□□□□□ -0.17
VPS8-222	ENST00000475580	MITF	O75030	526 aa	Predicted RBP	14	□□□□□ -0.17
VPS8-222	ENST00000475580	HMGN1	P05114	100 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	PRR23D2	P0DMB1	279 aa	Predicted RBP	14	□□□□□ -0.17
VPS8-222	ENST00000475580	GSTT1	P30711	240 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	CRISP1	P54107	249 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	SNAI3	Q3KNW1	292 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	CHRFAM7A	Q494W8	412 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	DPY19L4	Q7Z388	723 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	PARP8	Q8N3A8	854 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	BBS1	Q8NFJ9	593 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	ITLN1	Q8WWA0	313 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	DNAJC9	Q8WXX5	260 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	SPTSSA	Q969W0	71 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	OTULIN	Q96BN8	352 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	INTS14	Q96SY0	518 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	SLC30A2	Q9BRI3	323 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	COPS4	Q9BT78	406 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	OR51V1	Q9H2C8	321 aa		14	□□□□□ -0.17
VPS8-222	ENST00000475580	PAPOLB	Q9NRJ5	636 aa	Known RBP	14	□□□□□ -0.17
VPS8-222	ENST00000475580	CUBN	O60494	3623 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	SVEP1	Q4LDE5	3571 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	ZNF878	C9JN71	531 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580		H0YL77	283 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	MLNR	O43193	412 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	PAICS	P22234	425 aa	Known RBP	13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	SLC2A5	P22732	501 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	FAS	P25445	335 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	EIF2B1	Q14232	305 aa	Known RBP	13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	AMIGO2	Q86SJ2	522 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	ERI1	Q8IV48	349 aa	Known RBP	13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	CPO	Q8IVL8	374 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	ZNF283	Q8N7M2	679 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	OR10AD1	Q8NGE0	317 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	OR6N2	Q8NGY6	317 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	RNF133	Q8WVZ7	376 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	LRTOMT	Q8WZ04	291 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	ZMYND19	Q96E35	227 aa	Predicted RBP	13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	ZNF582	Q96NG8	517 aa	Predicted RBP	13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	OR2V2	Q96R30	315 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	AMELY	Q99218	206 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	KCNJ15	Q99712	375 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	ABHD6	Q9BV23	337 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	GABARAPL1	Q9H0R8	117 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	CENPM	Q9NSP4	180 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	KIF17	Q9P2E2	1029 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	IL19	Q9UHD0	177 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	CDC42EP3	Q9UKI2	254 aa		13.99	□□□□□ -0.17
VPS8-222	ENST00000475580	PRODH	O43272	600 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	SELENOF	O60613	162 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	TNFSF4	P23510	183 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	SLC6A9	P48067	706 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	PRKX	P51817	358 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	ZNF92	Q03936	586 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	FAM120AOS	Q5T036	256 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	KDM4D	Q6B0I6	523 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	DRAM2	Q6UX65	266 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	IL17REL	Q6ZVW7	336 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	SPATC1	Q76KD6	591 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	BHLHE23	Q8NDY6	225 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	OR2AE1	Q8NHA4	323 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	SIGLEC11	Q96RL6	698 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	ZNF665	Q9H7R5	613 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580	TMEM106B	Q9NUM4	274 aa		13.98	□□□□□ -0.17
VPS8-222	ENST00000475580		B4DSR2	109 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580		G3V2T6	193 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	CIB2	O75838	187 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	IGHV2-5	P01817	119 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	SLC2A1	P11166	492 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	SELE	P16581	610 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	TNFRSF1A	P19438	455 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	EPHA2	P29317	976 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	DVL1P1	P54792	670 aa	Predicted RBP	13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	SLC3A1	Q07837	685 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	MALL	Q13021	153 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	PTGES3	Q15185	160 aa	Known RBP	13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	CR1L	Q2VPA4	569 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	GLYATL3	Q5SZD4	288 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	CXXC5	Q7LFL8	322 aa	Known RBP	13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	OR13G1	Q8NGZ3	307 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	RAB1C	Q92928	201 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	TIMD4	Q96H15	378 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	MEGF10	Q96KG7	1140 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	REPIN1	Q9BWE0	567 aa	Known RBP	13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	BEX2	Q9BXY8	128 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	SHARPIN	Q9H0F6	387 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	TVP23B	Q9NYZ1	205 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	LPAR3	Q9UBY5	353 aa		13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.97	□□□□□ -0.17
VPS8-222	ENST00000475580	CCDC182	A6NF36	153 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580		F5H5P2	479 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	IGHV2-70	P01814	119 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	HLA-DPB1	P04440	258 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	FAM157C	P0CG43	387 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	FCGR1A	P12314	374 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	OPRL1	P41146	370 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	MMP16	P51512	607 aa		13.96	□□□□□ -0.17
VPS8-222	ENST00000475580	ESRRG	P62508	458 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms