RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 PLEK2Q9NYT0 353 aa6.15□□□□□ -1.42
SHQ1-207ENST00000475558 PTTG2Q9NZH5 202 aa6.15□□□□□ -1.42
SHQ1-207ENST00000475558 MRM2Q9UI43 246 aaKnown RBP6.15□□□□□ -1.42
SHQ1-207ENST00000475558 UGT2A1Q9Y4X1 527 aa6.15□□□□□ -1.42
SHQ1-207ENST00000475558 AKAP6Q13023 2319 aa6.15□□□□□ -1.43
SHQ1-207ENST00000475558 HCFC1P51610 2035 aa6.15□□□□□ -1.43
SHQ1-207ENST00000475558 IGKV1D-43A0A0B4J1Z2 117 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 CIB4A0PJX0 185 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 LOC110117498-PIK3R3F6TDL0 507 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 DVL2O14641 736 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 SGCEO43556 437 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 RGS9O75916 674 aaPredicted RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 APOL3O95236 402 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 MPZL1O95297 269 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 UBCP0CG48 685 aaKnown RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 IGFBP2P18065 325 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 MYL9P24844 172 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 CHRNB4P30926 498 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 CRYBB2P43320 205 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 MTNR1BP49286 362 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 GDI2P50395 445 aaKnown RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 HCCSP53701 268 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 UBE2NP61088 152 aaKnown RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 ARF1P84077 181 aaKnown RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 FMODQ06828 376 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 CTF1Q16619 201 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 TP53I3Q53FA7 332 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 ACSM3Q53FZ2 586 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 NCCRP1Q6ZVX7 275 aaPredicted RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 LUZP2Q86TE4 346 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 CDH26Q8IXH8 852 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 ELMOD2Q8IZ81 293 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF676Q8N7Q3 588 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 STEAP2Q8NFT2 490 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 OR1F12Q8NHA8 337 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 LILRB4Q8NHJ6 448 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 RPS4Y2Q8TD47 263 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 ACOT12Q8WYK0 555 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 RND1Q92730 232 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 NINJ1Q92982 152 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 C12orf43Q96C57 262 aaKnown RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 FOXRED1Q96CU9 486 aaPredicted RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 ATF6BQ99941 703 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 FOXC2Q99958 501 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF416Q9BWM5 594 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 OR10A2Q9H208 303 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 CXXC4Q9H2H0 198 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 MMP27Q9H306 513 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 OPA3Q9H6K4 179 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 EXOSC4Q9NPD3 245 aaKnown RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 SNTG1Q9NSN8 517 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 SLCO1C1Q9NYB5 712 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 CRNNQ9UBG3 495 aaPredicted RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 RABL2AQ9UBK7 228 aaPredicted RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 ASH2LQ9UBL3 628 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 EIF3KQ9UBQ5 218 aaKnown RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 CKLFQ9UBR5 152 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 KCNN3Q9UGI6 736 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 OR52A1Q9UKL2 312 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 HHLA2Q9UM44 414 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 COPS3Q9UNS2 423 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 RABL2BQ9UNT1 228 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 SF3B6Q9Y3B4 125 aaKnown RBP6.14□□□□□ -1.43
SHQ1-207ENST00000475558 HEATR5AQ86XA9 2040 aa6.14□□□□□ -1.43
SHQ1-207ENST00000475558 DNHD1Q96M86 4753 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 A0A0U1RQV5 110 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 LOC390937A0A1W2PQ73 354 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 ANKRD61A6NGH8 418 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 OR4C45A6NMZ5 311 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 DHRS7CA6NNS2 312 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 VSTM5A8MXK1 200 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 H3BMQ9 156 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 GPX5O75715 221 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 RPP14O95059 124 aaKnown RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 ALX3O95076 343 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 ABHD16AO95870 558 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 GLI4P10075 376 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 FOSL1P15407 271 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 PPP3CBP16298 524 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF182P17025 639 aaPredicted RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 KLK2P20151 261 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 ACHEP22303 614 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 CDAP32320 146 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 NTF4P34130 210 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 TGFBR2P37173 567 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 PEX19P40855 299 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 RAB1AP62820 205 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 SLC3A1Q07837 685 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 ENDOGQ14249 297 aaKnown RBP6.13□□□□□ -1.43
SHQ1-207ENST00000475558 FAM189A2Q15884 450 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 SSX1Q16384 188 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 CNPY1Q3B7I2 92 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 Q499Y3 187 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 PHYHD1Q5SRE7 291 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 BCL2L15Q5TBC7 163 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 MZT2AQ6P582 158 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 LRRN1Q6UXK5 716 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 TFAP2EQ6VUC0 442 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 C3P1Q6ZMU1 363 aa6.13□□□□□ -1.43
SHQ1-207ENST00000475558 PGAP1Q75T13 922 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms