RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 MAB21L1Q13394 359 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 DPY19L1Q2PZI1 675 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 PLA1AQ53H76 456 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 PRAMEF6Q5VXH4 476 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 ZCCHC23Q6ZST2 131 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 SLC30A8Q8IWU4 369 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 BHLHE23Q8NDY6 225 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 AENQ8WTP8 325 aaKnown RBP6.38□□□□□ -1.39
USP54-211ENST00000474929 ST6GALNAC6Q969X2 333 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 APOBEC3DQ96AK3 386 aaPredicted RBP6.38□□□□□ -1.39
USP54-211ENST00000474929 EME1Q96AY2 570 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 ZNF347Q96SE7 839 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 SLC35A5Q9BS91 424 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 ST6GALNAC5Q9BVH7 336 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 LRP12Q9Y561 859 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 CAPN7Q9Y6W3 813 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 DNAH10Q8IVF4 4471 aa6.38□□□□□ -1.39
USP54-211ENST00000474929 A0A087WUV0 522 aaPredicted RBP6.37□□□□□ -1.39
USP54-211ENST00000474929 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.37□□□□□ -1.39
USP54-211ENST00000474929 A0A1B0GWA3 101 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 hCG_1807616A0A1W2PRN6 198 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 AZIN1O14977 448 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 SGCEO43556 437 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 GMDSO60547 372 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 LPLP06858 475 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 GP9P14770 177 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 MSR1P21757 451 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 CEBPDP49716 269 aaPredicted RBP6.37□□□□□ -1.39
USP54-211ENST00000474929 ERFP50548 548 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 ARHGDIBP52566 201 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 DLX1P56177 255 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 CAV3P56539 151 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 PRSS12P56730 875 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 PRB3Q04118 309 aaPredicted RBP6.37□□□□□ -1.39
USP54-211ENST00000474929 MFGE8Q08431 387 aaPredicted RBP6.37□□□□□ -1.39
USP54-211ENST00000474929 NFYCQ13952 458 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 OR8G1Q15617 311 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 HCP5Q6MZN7 132 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 BLOC1S3Q6QNY0 202 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 RIMKLAQ8IXN7 391 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 CLECL1Q8IZS7 167 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 GCSAMQ8N6F7 178 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 OR8J2Q8NGG1 315 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 OR2T11Q8NH01 316 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 OR5K1Q8NHB7 308 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 CHPT1Q8WUD6 406 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 MED30Q96HR3 178 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 TEX37Q96LM6 180 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 MOGAT1Q96PD6 335 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 MRPL13Q9BYD1 178 aaKnown RBP6.37□□□□□ -1.39
USP54-211ENST00000474929 SLCO1B3Q9NPD5 702 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 THUMPD1Q9NXG2 353 aaKnown RBP6.37□□□□□ -1.39
USP54-211ENST00000474929 VNN3Q9NY84 501 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 A4GNTQ9UNA3 340 aa6.37□□□□□ -1.39
USP54-211ENST00000474929 PRSS51A0A1B0GVH4 220 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 FAM90A8PA6NJQ4 464 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 NPIPB13A6NJU9 1138 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 A6NLC8 198 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 NPIPB4C9JG80 1138 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 M0R3H8 397 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 FCN3O75636 299 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 HLA-DPB1P04440 258 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 HIST1H2ABP04908 130 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 IGHV4-30-4P0DP06 118 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 ETS2P15036 469 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 ACADSP16219 412 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 POU1F1P28069 291 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 LAP3P28838 519 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 CDAP32320 146 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 OR3A4PP47883 348 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 WDR4P57081 412 aaKnown RBP6.36□□□□□ -1.39
USP54-211ENST00000474929 OR12D2P58182 307 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 SPIBQ01892 262 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 CD47Q08722 323 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 IKZF1Q13422 519 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 IL18R1Q13478 541 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 MPPED2Q15777 294 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 PGS1Q32NB8 556 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 WDR38Q5JTN6 314 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 RNLSQ5VYX0 342 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 Q6ZS46 218 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 TRMT10CQ7L0Y3 403 aaKnown RBP6.36□□□□□ -1.39
USP54-211ENST00000474929 HIST3H2AQ7L7L0 130 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 LSRQ86X29 649 aaPredicted RBP6.36□□□□□ -1.39
USP54-211ENST00000474929 GLB1L2Q8IW92 636 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 CLEC4FQ8N1N0 589 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 FAM216BQ8N7L0 139 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 FNDC5Q8NAU1 212 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 OR6Q1Q8NGQ2 317 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 OR9Q1Q8NGQ5 310 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 HIST1H2ACQ93077 130 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 DUS3LQ96G46 650 aaKnown RBP6.36□□□□□ -1.39
USP54-211ENST00000474929 RAX2Q96IS3 184 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 PAFAH2Q99487 392 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 ADAT1Q9BUB4 502 aaKnown RBP6.36□□□□□ -1.39
USP54-211ENST00000474929 EVA1AQ9H8M9 152 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 RNPEPL1Q9HAU8 725 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 C14orf119Q9NWQ9 140 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 C1orf123Q9NWV4 160 aa6.36□□□□□ -1.39
USP54-211ENST00000474929 PTTG3PQ9NZH4 202 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms