RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 GK2Q14410 553 aaPredicted RBP17.13■□□□□ 0.33
HLA-B-252ENST00000474381 SLC35D3Q5M8T2 416 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 OR2T2Q6IF00 324 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 DPY19L4Q7Z388 723 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 NAA40Q86UY6 237 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 ERI1Q8IV48 349 aaKnown RBP17.13■□□□□ 0.33
HLA-B-252ENST00000474381 TIGD4Q8IY51 512 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 OR2Z1Q8NG97 314 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 OR6N2Q8NGY6 317 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 OR13G1Q8NGZ3 307 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 KCNJ15Q99712 375 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 PRRG3Q9BZD7 231 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 TOR3AQ9H497 397 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 KRT84Q9NSB2 600 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 LPAR3Q9UBY5 353 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 ENOPH1Q9UHY7 261 aa17.13■□□□□ 0.33
HLA-B-252ENST00000474381 A0A1B0GWJ7 208 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 TGFAP01135 160 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 SLC6A9P48067 706 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 CDH15P55291 814 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 GRB2P62993 217 aaKnown RBP17.12■□□□□ 0.33
HLA-B-252ENST00000474381 EIF2B1Q14232 305 aaKnown RBP17.12■□□□□ 0.33
HLA-B-252ENST00000474381 PTGES3Q15185 160 aaKnown RBP17.12■□□□□ 0.33
HLA-B-252ENST00000474381 TAF13Q15543 124 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 TMEM236Q5W0B7 351 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 KDM4DQ6B0I6 523 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 CPOQ8IVL8 374 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 LINC01356Q8N9X3 169 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 RNF133Q8WVZ7 376 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 LRTOMTQ8WZ04 291 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 CCL17Q92583 94 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 RAB1CQ92928 201 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 SLC30A2Q9BRI3 323 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 SOX7Q9BT81 388 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 CENPMQ9NSP4 180 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 CACNG2Q9Y698 323 aa17.12■□□□□ 0.33
HLA-B-252ENST00000474381 CHD3Q12873 2000 aaKnown RBP17.12■□□□□ 0.33
HLA-B-252ENST00000474381 ANK3Q12955 4377 aaKnown RBP17.11■□□□□ 0.33
HLA-B-252ENST00000474381 EBAG9O00559 213 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 APOC1P02654 83 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 ACTR3P61158 418 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 SNAPC1Q16533 368 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 CHRFAM7AQ494W8 412 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 PGAP1Q75T13 922 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 CXXC5Q7LFL8 322 aaKnown RBP17.11■□□□□ 0.33
HLA-B-252ENST00000474381 AMIGO2Q86SJ2 522 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 OR5AS1Q8N127 324 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 ZNF454Q8N9F8 522 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 ZMYND19Q96E35 227 aaPredicted RBP17.11■□□□□ 0.33
HLA-B-252ENST00000474381 CENPNQ96H22 339 aaPredicted RBP17.11■□□□□ 0.33
HLA-B-252ENST00000474381 ABHD6Q9BV23 337 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 OPA3Q9H6K4 179 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 WIPI2Q9Y4P8 454 aa17.11■□□□□ 0.33
HLA-B-252ENST00000474381 B4DSR2 109 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 IFNL4K9M1U5 179 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 SLC2A5P22732 501 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 LMO4P61968 165 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 KLHL12Q53G59 568 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 MRPL21Q7Z2W9 205 aaKnown RBP17.1■□□□□ 0.33
HLA-B-252ENST00000474381 PEG10Q86TG7 708 aaKnown RBP17.1■□□□□ 0.33
HLA-B-252ENST00000474381 OTOSQ8NHW6 89 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 OR2V2Q96R30 315 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 OSBPL10Q9BXB5 764 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 SP140LQ9H930 580 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 TVP23BQ9NYZ1 205 aa17.1■□□□□ 0.33
HLA-B-252ENST00000474381 NOP16Q9Y3C1 178 aaKnown RBP17.1■□□□□ 0.33
HLA-B-252ENST00000474381 WNT9BO14905 357 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 IGFBP5P24593 272 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 PRKXP51817 358 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 MVKQ03426 396 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 SNAI3Q3KNW1 292 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 SPRNQ5BIV9 151 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 SLX4IPQ5VYV7 408 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 C10orf67Q8IYJ2 551 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 ZNF283Q8N7M2 679 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 BHLHE23Q8NDY6 225 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 ITLN1Q8WWA0 313 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 RAB39BQ96DA2 213 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 REPIN1Q9BWE0 567 aaKnown RBP17.09■□□□□ 0.33
HLA-B-252ENST00000474381 SHARPINQ9H0F6 387 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 NARFLQ9H6Q4 476 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 TMEM106BQ9NUM4 274 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 TMEM100Q9NV29 134 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 PPP1R3CQ9UQK1 317 aa17.09■□□□□ 0.33
HLA-B-252ENST00000474381 ZAR1LA6NP61 321 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 XRCC2O43543 280 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 LYNP07948 512 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 PCMT1P22061 227 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 HSD11B1P28845 292 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 OPRL1P41146 370 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 SRP9P49458 86 aaKnown RBP17.08■□□□□ 0.32
HLA-B-252ENST00000474381 DVL1P1P54792 670 aaPredicted RBP17.08■□□□□ 0.32
HLA-B-252ENST00000474381 AVPI1Q5T686 147 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 ZFP1Q6P2D0 407 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 BBS1Q8NFJ9 593 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 SPSB4Q96A44 273 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 SLC22A4Q9H015 551 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 TREM2Q9NZC2 230 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 OAZ3Q9UMX2 235 aa17.08■□□□□ 0.32
HLA-B-252ENST00000474381 YLPM1P49750 1951 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms