RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 TRPV1Q8NER1 839 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 JOSD2Q8TAC2 188 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 DTX3LQ8TDB6 740 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 NAT14Q8WUY8 206 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 RXFP2Q8WXD0 754 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 NT5C3BQ969T7 300 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 TM4SF19Q96DZ7 209 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 CCDC126Q96EE4 140 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 NRBF2Q96F24 287 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 RILPQ96NA2 401 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 PPP1R2P1Q96PQ5 205 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 ZBTB18Q99592 522 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 HOPXQ9BPY8 73 aaPredicted RBP2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 NRIP2Q9BQI9 281 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 TMEM246Q9BRR3 403 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 MRPS26Q9BYN8 205 aaKnown RBP2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 OR11A1Q9GZK7 315 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 C20orf27Q9GZN8 174 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 DEFB127Q9H1M4 99 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 FN3KRPQ9HA64 309 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 NMRAL1Q9HBL8 299 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF331Q9NQX6 463 aaPredicted RBP2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 CCL28Q9NRJ3 127 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 CLCF1Q9UBD9 225 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF225Q9UK10 706 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 GTF3C1Q12789 2109 aa2.29□□□□□ -2.04
TMEM50B-208ENST00000474272 XIRP1Q702N8 1843 aaKnown RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 QSER1Q2KHR3 1735 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ABCA3Q99758 1704 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 PTPRJQ12913 1337 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 BAZ2BQ9UIF8 2168 aaKnown RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 A0A1W2PPE3 182 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 LRRIQ4A6NIV6 560 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 C12orf77C9JDV5 145 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 GOLGA8SH3BPF8 625 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 GOLGA8MH3BSY2 632 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 BOLA2-SMG1P6H3BVE0 249 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 GOLGA8RI6L899 631 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 H6PDO95479 791 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 FGF4P08620 206 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 COX4I1P13073 169 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ETS2P15036 469 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 HOXB8P17481 243 aaPredicted RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 CD9P21926 228 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 S100A1P23297 94 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 SDC4P31431 198 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 FMO3P31513 532 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 TAGLN2P37802 199 aaKnown RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 MRPL19P49406 292 aaKnown RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ARRB1P49407 418 aaPredicted RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 CDK9P50750 372 aaKnown RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 KDSRQ06136 332 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 PPIDQ08752 370 aaKnown RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 LRRC74AQ0VAA2 488 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 LAMTOR4Q0VGL1 99 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ART3Q13508 389 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 CYTH1Q15438 398 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 DGUOKQ16854 277 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF829Q3KNS6 432 aaPredicted RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF658BQ4V348 819 aaPredicted RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 COQ5Q5HYK3 327 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 PHYHD1Q5SRE7 291 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 N4BP2L1Q5TBK1 243 aaPredicted RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 GPR157Q5UAW9 335 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 PDPK2PQ6A1A2 396 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 RWDD4Q6NW29 188 aaKnown RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ALKAL1Q6UXT8 129 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 IZUMO2Q6UXV1 221 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 COX15Q7KZN9 410 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 H2BFWTQ7Z2G1 175 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 NANOGNBQ7Z5D8 188 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 PAQR7Q86WK9 346 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 C10orf107Q8IVU9 208 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 BBS5Q8N3I7 341 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 LRRC52Q8N7C0 313 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF420Q8TAQ5 688 aaPredicted RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 NTAN1Q96AB6 310 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ASB9Q96DX5 294 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF799Q96GE5 643 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF641Q96N77 438 aaPredicted RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 BIRC8Q96P09 236 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 CATSPER2Q96P56 530 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 OR2M2Q96R28 347 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 SORT1Q99523 831 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 KIFC1Q9BW19 673 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 OSBPL11Q9BXB4 747 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 CALN1Q9BXU9 219 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 IL22Q9GZX6 179 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 SRMSQ9H3Y6 488 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ANKRD19PQ9H560 264 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 TMEM165Q9HC07 324 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 EML4Q9HC35 981 aaKnown RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 MYOZ2Q9NPC6 264 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 FBXO6Q9NRD1 293 aaPredicted RBP2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 ARMC1Q9NVT9 282 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 FKBP14Q9NWM8 211 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 GIN1Q9NXP7 522 aa2.28□□□□□ -2.04
TMEM50B-208ENST00000474272 TMEM216Q9P0N5 145 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms