RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 GMPPBQ9Y5P6 360 aa11.75□□□□□ -0.53
USF1-205ENST00000473969 IGHV4-30-2A0A087WSY4 118 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 CCDC182A6NF36 153 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 PHYHO14832 338 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 PSKH1P11801 424 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 CX3CR1P49238 355 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 MMP15P51511 669 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 CCL8P80075 99 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 EFNB1P98172 346 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 POU4F2Q12837 409 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 HLXQ14774 488 aaPredicted RBP11.74□□□□□ -0.53
USF1-205ENST00000473969 TRIP10Q15642 601 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 OR2T2Q6IF00 324 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 PGAP1Q75T13 922 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 BCDIN3DQ7Z5W3 292 aaKnown RBP11.74□□□□□ -0.53
USF1-205ENST00000473969 BIVMQ86UB2 503 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 NAA40Q86UY6 237 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 OR5AS1Q8N127 324 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 ZNF786Q8N393 782 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 C10orf105Q8TEF2 133 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 ASB17Q8WXJ9 295 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 COX4I2Q96KJ9 171 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 HRASLS5Q96KN8 279 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 MNTQ99583 582 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 SLC29A1Q99808 456 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 MROQ9BYG7 248 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 OPA3Q9H6K4 179 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 NIPAL2Q9H841 368 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 SAP30LQ9HAJ7 183 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 C8orf4Q9NR00 106 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 DNAJC27Q9NZQ0 273 aa11.74□□□□□ -0.53
USF1-205ENST00000473969 GGT3PA6NGU5 568 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 ZNF670-ZNF695F2Z2N8 137 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 XRCC2O43543 280 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 HPXP02790 462 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 ALOX5APP20292 161 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 OTX1P32242 354 aaPredicted RBP11.73□□□□□ -0.53
USF1-205ENST00000473969 OPRL1P41146 370 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 MAGEB1P43366 347 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 MRPS11P82912 194 aaKnown RBP11.73□□□□□ -0.53
USF1-205ENST00000473969 TMED1Q13445 227 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 GGTLC2Q14390 218 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 ITPR3Q14573 2671 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 TIGD6Q17RP2 521 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 LRRC36Q1X8D7 754 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 DNM1P46Q6ZS02 220 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 USP51Q70EK9 711 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 SLC35F2Q8IXU6 374 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 GALNT4Q8N4A0 578 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 OR2Z1Q8NG97 314 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 OR51G2Q8NGK0 314 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 SPRYD4Q8WW59 207 aaPredicted RBP11.73□□□□□ -0.53
USF1-205ENST00000473969 PGAM5Q96HS1 289 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 RDH12Q96NR8 316 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 MSL2Q9HCI7 577 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 BRD7Q9NPI1 651 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 DLL4Q9NR61 685 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 HAO2Q9NYQ3 351 aa11.73□□□□□ -0.53
USF1-205ENST00000473969 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.73□□□□□ -0.53
USF1-205ENST00000473969 IGHV1-69-2A0A0G2JMI3 117 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 MPZL2O60487 215 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 IGHV1-46P01743 117 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 SLC2A1P11166 492 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 ACHEP22303 614 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 USF1P22415 310 aaPredicted RBP11.72□□□□□ -0.53
USF1-205ENST00000473969 CFL1P23528 166 aaKnown RBP11.72□□□□□ -0.53
USF1-205ENST00000473969 HTR1FP30939 366 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 HCCSP53701 268 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 TNFAIP6P98066 277 aaPredicted RBP11.72□□□□□ -0.53
USF1-205ENST00000473969 GK2Q14410 553 aaPredicted RBP11.72□□□□□ -0.53
USF1-205ENST00000473969 HFEQ30201 348 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 MEDAGQ5VYS4 303 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 DEGS2Q6QHC5 323 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 FAM57BQ71RH2 274 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 CIARTQ8N365 385 aaPredicted RBP11.72□□□□□ -0.53
USF1-205ENST00000473969 BHLHE23Q8NDY6 225 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 OR8G5Q8NG78 346 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 OR52H1Q8NGJ2 320 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 OR13G1Q8NGZ3 307 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 GTF3AQ92664 365 aaKnown RBP11.72□□□□□ -0.53
USF1-205ENST00000473969 ELMOD3Q96FG2 381 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 OR10A2Q9H208 303 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 VCXQ9H320 206 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 DCLRE1BQ9H816 532 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 CHODLQ9H9P2 273 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 TMEM100Q9NV29 134 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 SMPD3Q9NY59 655 aaPredicted RBP11.72□□□□□ -0.53
USF1-205ENST00000473969 IKZF2Q9UKS7 526 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 NOP16Q9Y3C1 178 aaKnown RBP11.72□□□□□ -0.53
USF1-205ENST00000473969 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 RTTNQ86VV8 2226 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 ARFGEF3Q5TH69 2177 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 AKAP9Q99996 3911 aa11.72□□□□□ -0.53
USF1-205ENST00000473969 LOC100130705A0A1B0GUX0 176 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 ZSCAN5BA6NJL1 495 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 IQCF6A8MYZ5 107 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 LYNX1G3V0Z9 82 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 H0YHG0 523 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 CDC14BO60729 498 aa11.71□□□□□ -0.53
USF1-205ENST00000473969 ZNF254O75437 659 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms