RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 LDLRAD4O15165 306 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 GMDSO60547 372 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 ZNF780AO75290 641 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 STK17BO94768 372 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 WNT11O96014 354 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 CYB5AP00167 134 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 PDGFBP01127 241 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 TTRP02766 147 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 ALDOBP05062 364 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 SERPINA7P05543 415 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 CHRM2P08172 466 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 MELTFP08582 738 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 GIPP09681 153 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 TCEA1P23193 301 aaKnown RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 DNASE1P24855 282 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 CTSSP25774 331 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 EIF1AXP47813 144 aaKnown RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 VEGFCP49767 419 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 RGS19P49795 217 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 CLDN17P56750 224 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 RAP2BP61225 183 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 ST3GAL2Q16842 350 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 PDSS1Q5T2R2 415 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 ZNF626Q68DY1 528 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 JMJD6Q6NYC1 403 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 STEAP1BQ6NZ63 245 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 MTFR2Q6P444 385 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 FOXL2NBQ6ZUU3 175 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 ZNF627Q7L945 461 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 MDGA2Q7Z553 956 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 COMMD2Q86X83 199 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 MAML2Q8IZL2 1156 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 ZNF283Q8N7M2 679 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 PNLDC1Q8NA58 520 aaKnown RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 GJC3Q8NFK1 279 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 OR11H7Q8NGC8 314 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 GPX8Q8TED1 209 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 TMEM54Q969K7 222 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 FGGYQ96C11 551 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 NTNG2Q96CW9 530 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 C10orf35Q96D05 121 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 CPNE2Q96FN4 548 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 NPAS1Q99742 590 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 MESP1Q9BRJ9 268 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 GINS4Q9BRT9 223 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 ALX4Q9H161 411 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 CLEC4MQ9H2X3 399 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 NELFAQ9H3P2 528 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 TMEM185BQ9H7F4 350 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 ZNF160Q9HCG1 818 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 SH2D2AQ9NP31 389 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 MRPL15Q9P015 296 aaKnown RBP6.76□□□□□ -1.33
CCDC171-205ENST00000472806 GHRLQ9UBU3 117 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 MGAT4AQ9UM21 535 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 LOXL2Q9Y4K0 774 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 RNF114Q9Y508 228 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 GON4LQ3T8J9 2241 aa6.76□□□□□ -1.33
CCDC171-205ENST00000472806 RP1P56715 2156 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 CACNA1EQ15878 2313 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 A0A087WV48 116 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 IGKV1D-43A0A0B4J1Z2 117 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 OR2M5A3KFT3 312 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 PATE3B3GLJ2 98 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 H3BSH0 61 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 RAD1O60671 282 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 MTRF1O75570 445 aaKnown RBP6.75□□□□□ -1.33
CCDC171-205ENST00000472806 RGS11O94810 467 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 RAB3DO95716 219 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 JMJD7P0C870 316 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 CCL3P10147 92 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 TBPP20226 339 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 CCL1P22362 96 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 MPLP40238 635 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 CASRP41180 1078 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 CX3CR1P49238 355 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 EFNB2P52799 333 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 SUCLG1P53597 346 aaKnown RBP6.75□□□□□ -1.33
CCDC171-205ENST00000472806 CLDN6P56747 220 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 H3F3AP84243 136 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 SPOCK1Q08629 439 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 PMPCAQ10713 525 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 ECH1Q13011 328 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 ARL6IP1Q15041 203 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 SGCAQ16586 387 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 LINC00303Q3SY05 128 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 ACTBL2Q562R1 376 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 CARD17Q5XLA6 110 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 CORO6Q6QEF8 472 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 ZNF813Q6ZN06 617 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 DBX2Q6ZNG2 339 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 ABHD12BQ7Z5M8 362 aaPredicted RBP6.75□□□□□ -1.33
CCDC171-205ENST00000472806 ZNF584Q8IVC4 421 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 GABRG1Q8N1C3 465 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 C9orf62Q8N4C0 152 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 ESX1Q8N693 406 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 OR9K2Q8NGE7 335 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 OR4C16Q8NGL9 310 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 OR2I1PQ8NGU4 316 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 SPTSSAQ969W0 71 aa6.75□□□□□ -1.33
CCDC171-205ENST00000472806 PGAM5Q96HS1 289 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms