RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 A0A1B0GWJ7 208 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 KRT36O76013 467 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 ZNF823P16415 610 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 CPT2P23786 658 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 UBA52P62987 128 aaKnown RBP18.89■□□□□ 0.61
C9orf3-213ENST00000471978 MXRA7P84157 204 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 ZNF181Q2M3W8 571 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 KLF17Q5JT82 389 aaPredicted RBP18.89■□□□□ 0.61
C9orf3-213ENST00000471978 OR52L1Q8NGH7 329 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 SLCO4A1Q96BD0 722 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 SSBP3Q9BWW4 388 aaPredicted RBP18.89■□□□□ 0.61
C9orf3-213ENST00000471978 PLA2G12AQ9BZM1 189 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 NDE1Q9NXR1 346 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 ZNF69Q9UC07 566 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 KCNG2Q9UJ96 466 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 ARL2BPQ9Y2Y0 163 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 CDH10Q9Y6N8 788 aa18.89■□□□□ 0.61
C9orf3-213ENST00000471978 PYCR1P32322 319 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 PMELP40967 661 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 HMGA2P52926 109 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 TPTEP56180 551 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 SPATS1Q496A3 300 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 RPL13AP3Q6NVV1 102 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 PGAP1Q75T13 922 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 KLBQ86Z14 1044 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 C1orf87Q8N0U7 546 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 CYB561A3Q8NBI2 242 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 PROKR2Q8NFJ6 384 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 MAP6Q96JE9 813 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 TMEM246Q9BRR3 403 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 MIOXQ9UGB7 285 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 LYVE1Q9Y5Y7 322 aa18.88■□□□□ 0.61
C9orf3-213ENST00000471978 TNFRSF11BO00300 401 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 BHLHE40O14503 412 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 CD80P33681 288 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 GYS2P54840 703 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 GNB2P62879 340 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 GNGT1P63211 74 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 PAX8Q06710 450 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 MAB21L1Q13394 359 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 FAM201AQ5SY85 155 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 CYP2R1Q6VVX0 501 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 OR9Q2Q8NGE9 314 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 SPRYD4Q8WW59 207 aaPredicted RBP18.87■□□□□ 0.61
C9orf3-213ENST00000471978 SPTSSAQ969W0 71 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 BTBD10Q9BSF8 475 aa18.87■□□□□ 0.61
C9orf3-213ENST00000471978 TVP23AA6NH52 213 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 M0R135 149 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 DCTN3O75935 186 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 FSTL3O95633 263 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 IRF2P14316 349 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 RPS27P42677 84 aaKnown RBP18.86■□□□□ 0.61
C9orf3-213ENST00000471978 GATA4P43694 442 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 PAX2Q02962 417 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 TUSC1Q2TAM9 212 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 ZNF404Q494X3 552 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 BTNL3Q6UXE8 466 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 DOK3Q7L591 496 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 MRPL21Q7Z2W9 205 aaKnown RBP18.86■□□□□ 0.61
C9orf3-213ENST00000471978 PIGWQ7Z7B1 504 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 BCL6BQ8N143 479 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-213ENST00000471978 LINC00471Q8N535 108 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 CELF2-AS1Q8N7Q2 184 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 OR10S1Q8NGN2 331 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 OR2T4Q8NH00 348 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 NEIL1Q96FI4 390 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-213ENST00000471978 ZNF799Q96GE5 643 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 PLEKHA8Q96JA3 519 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 DDOQ99489 341 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 TRIM15Q9C019 465 aa18.86■□□□□ 0.61
C9orf3-213ENST00000471978 GASTP01350 101 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 LRRN1Q6UXK5 716 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 NLRC3Q7RTR2 1065 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 OR8B3Q8NGG8 313 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 OR51L1Q8NGJ5 315 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 OR11L1Q8NGX0 322 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 ZNRF4Q8WWF5 429 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 ERGIC1Q969X5 290 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 ZMYND19Q96E35 227 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-213ENST00000471978 OR8B2Q96RD0 313 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 IL20Q9NYY1 176 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 ACTR3BQ9P1U1 418 aa18.85■□□□□ 0.61
C9orf3-213ENST00000471978 IGHV2-70DA0A0C4DH43 119 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 ATP6V1B2P21281 511 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 CD200P41217 278 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 OR8G1Q15617 311 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 SNAI3Q3KNW1 292 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 AWAT1Q58HT5 328 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 ZNF362Q5T0B9 420 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-213ENST00000471978 PRAMEF6Q5VXH4 476 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 ZNF770Q6IQ21 691 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-213ENST00000471978 OR4C15Q8NGM1 316 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 OR8D4Q8NGM9 314 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 Q8TCH9 128 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 RAB40AQ8WXH6 277 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 DUX5Q96PT3 197 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 MS4A7Q9GZW8 240 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-213ENST00000471978 UFSP2Q9NUQ7 469 aa18.84■□□□□ 0.61
C9orf3-213ENST00000471978 DNAJC9-AS1A6NH13 148 aa18.83■□□□□ 0.6
C9orf3-213ENST00000471978 CD300LBA8K4G0 201 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms