RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 SULT1E1P49888 294 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 SYNJ2BPP57105 145 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 RPS23P62266 143 aaKnown RBP1.21□□□□□ -2.22
RBM39-228ENST00000471635 RPL23P62829 140 aaKnown RBP1.21□□□□□ -2.22
RBM39-228ENST00000471635 SEMG2Q02383 582 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 SP4Q02446 784 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 TNFRSF9Q07011 255 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 TGM3Q08188 693 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 IHHQ14623 411 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 PPP1R7Q15435 360 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 ADNP2Q6IQ32 1131 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 GUSBP11Q6P575 273 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 NKAIN4Q8IVV8 208 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 CMTM1Q8IZ96 169 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 CHST4Q8NCG5 386 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 OR11H7Q8NGC8 314 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 OR56B2PQ8NGI1 322 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 OR52E2Q8NGJ4 325 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 AKR7LQ8NHP1 331 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 ELMO1Q92556 727 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 CENPKQ9BS16 269 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 ANKRD60Q9BZ19 345 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 PKIBQ9C010 78 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 ANKRA2Q9H9E1 313 aa1.21□□□□□ -2.22
RBM39-228ENST00000471635 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.21□□□□□ -2.22
RBM39-228ENST00000471635 TRAV6A0A075B6T7 132 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 HEATR9A2RTY3 570 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 GABRR3A8MPY1 467 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 H7C1H1 209 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 SIRPB1O00241 398 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 PLPP1O14494 284 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 SCAMP2O15127 329 aaKnown RBP1.2□□□□□ -2.22
RBM39-228ENST00000471635 EIF4E2O60573 245 aaKnown RBP1.2□□□□□ -2.22
RBM39-228ENST00000471635 FLOT1O75955 427 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 GLSO94925 669 aaPredicted RBP1.2□□□□□ -2.22
RBM39-228ENST00000471635 ARG1P05089 322 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 CT45A6P0DMU7 189 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 CT45A5P0DMU8 189 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 CT45A7P0DMV0 189 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 CD37P11049 281 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 RBM34P42696 430 aaKnown RBP1.2□□□□□ -2.22
RBM39-228ENST00000471635 CCNG1P51959 295 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 EIF3EP60228 445 aaKnown RBP1.2□□□□□ -2.22
RBM39-228ENST00000471635 SELENBP1Q13228 472 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 XKR7Q5GH72 579 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 CT45A1Q5HYN5 189 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 C1orf185Q5T7R7 199 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 FAM222AQ5U5X8 452 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 C9orf135Q5VTT2 229 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 REEP3Q6NUK4 255 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 SLC16A14Q7RTX9 510 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 NANOGNBQ7Z5D8 188 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 ZNF101Q8IZC7 436 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 GTPBP8Q8N3Z3 284 aaPredicted RBP1.2□□□□□ -2.22
RBM39-228ENST00000471635 SLC35G3Q8N808 338 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 CT45A3Q8NHU0 189 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 CAPSLQ8WWF8 208 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 DCPSQ96C86 337 aaKnown RBP1.2□□□□□ -2.22
RBM39-228ENST00000471635 RNF145Q96MT1 663 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 RHOXF2Q9BQY4 288 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 RSG1Q9BU20 258 aa1.2□□□□□ -2.22
RBM39-228ENST00000471635 COL22A1Q8NFW1 1626 aaPredicted RBP1.19□□□□□ -2.22
RBM39-228ENST00000471635 SMIM26A0A096LP01 95 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 XKRY2A2RUG3 117 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 OR5H1A6NKK0 313 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 NDUFC2-KCTD14E9PQ53 114 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 EIF3HO15372 352 aaKnown RBP eCLIP1.19□□□□□ -2.22
RBM39-228ENST00000471635 RAD51CO43502 376 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 RNF13O43567 381 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 IGHV3-11P01762 117 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 POLR2IP36954 125 aaKnown RBP1.19□□□□□ -2.22
RBM39-228ENST00000471635 ATP5IP56385 69 aaPredicted RBP1.19□□□□□ -2.22
RBM39-228ENST00000471635 DGCR6Q14129 220 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 ZNF266Q14584 549 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 TEX30Q5JUR7 227 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 PRAMEF20Q5VT98 475 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 C22orf42Q6IC83 251 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 C12orf54Q6X4T0 127 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 MBOAT2Q6ZWT7 520 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 MRPL55Q7Z7F7 128 aaKnown RBP1.19□□□□□ -2.22
RBM39-228ENST00000471635 CMC1Q7Z7K0 106 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 CBLN2Q8IUK8 224 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 FAM71AQ8IYT1 594 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 GPR26Q8NDV2 337 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 Q8NDZ9 215 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 OR4A4PQ8NGN8 299 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 APH1BQ8WW43 257 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 ECHDC3Q96DC8 303 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 WDR34Q96EX3 536 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 TPD52L3Q96J77 140 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 IP6K3Q96PC2 410 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 NUP58Q9BVL2 599 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 ZSCAN16Q9H4T2 348 aaPredicted RBP1.19□□□□□ -2.22
RBM39-228ENST00000471635 TMEM27Q9HBJ8 222 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 C21orf62Q9NYP8 219 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 MTCH1Q9NZJ7 389 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 CCDC59Q9P031 241 aaKnown RBP1.19□□□□□ -2.22
RBM39-228ENST00000471635 SLC17A7Q9P2U7 560 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 SLC17A4Q9Y2C5 497 aa1.19□□□□□ -2.22
RBM39-228ENST00000471635 DOCK6Q96HP0 2047 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms