RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 RPS6KA6Q9UK32 745 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 AURKCQ9UQB9 309 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 N6AMT1Q9Y5N5 214 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 KPTNQ9Y664 436 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 CAPN7Q9Y6W3 813 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 U3KQK5 164 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 F5H5K5 113 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 M0QX08 132 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 XKRYO14609 159 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 UBDO15205 165 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 RER1O15258 196 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 ANGPTL7O43827 346 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 ICMTO60725 284 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 ECDO95905 644 aaPredicted RBP5.62□□□□□ -1.51
HDAC1-204ENST00000471488 CHRM2P08172 466 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 COX5BP10606 129 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 TNFRSF1BP20333 461 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 KIR2DS4P43632 304 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 RGS6P49758 472 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 MALLQ13021 153 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 AQP6Q13520 282 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 LRRC75BQ2VPJ9 315 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 LINC00114Q6XXX2 140 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 CCDC121Q6ZUS5 278 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 MRPL21Q7Z2W9 205 aaKnown RBP5.62□□□□□ -1.51
HDAC1-204ENST00000471488 KIRREL3Q8IZU9 778 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 FAM216BQ8N7L0 139 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 ANKRD42Q8N9B4 389 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 OR4D11Q8NGI4 311 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 OR51A7Q8NH64 312 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 SLC7A13Q8TCU3 470 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 NPRL2Q8WTW4 380 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 TMEM239Q8WW34 195 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 APOBEC3DQ96AK3 386 aaPredicted RBP5.62□□□□□ -1.51
HDAC1-204ENST00000471488 MPP4Q96JB8 637 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 ALG12Q9BV10 488 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 NSRP1Q9H0G5 558 aaKnown RBP5.62□□□□□ -1.51
HDAC1-204ENST00000471488 TRIM36Q9NQ86 728 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 SLC25A37Q9NYZ2 338 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 ZIM2Q9NZV7 527 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 SLAMF8Q9P0V8 285 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 SH3GLB1Q9Y371 365 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 MED31Q9Y3C7 131 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 MAB21L2Q9Y586 359 aa5.62□□□□□ -1.51
HDAC1-204ENST00000471488 TRAV27A0A087WT01 109 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 OR6C6A6NF89 314 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 GGT3PA6NGU5 568 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 A6NIZ1 184 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 IQCF6A8MYZ5 107 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 H0YAE9 185 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 C3orf84H3BNL1 204 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 NDUFB3O43676 98 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 NDUFA2O43678 99 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 CHST1O43916 411 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 SLC16A7O60669 478 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 LYPD3O95274 346 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 CLIC3O95833 236 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 LCATP04180 440 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 BMP2P12643 396 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 IFI30P13284 250 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 NDUFB7P17568 137 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 PPIBP23284 216 aaKnown RBP5.61□□□□□ -1.51
HDAC1-204ENST00000471488 LMO1P25800 156 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 GGT2P36268 569 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 SLC9A3P48764 834 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 ZNF133P52736 654 aaPredicted RBP5.61□□□□□ -1.51
HDAC1-204ENST00000471488 EPPK1P58107 5090 aaKnown RBP5.61□□□□□ -1.51
HDAC1-204ENST00000471488 RAP1BP61224 184 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 RAP1AP62834 184 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 BLMHQ13867 455 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 TMEM95Q3KNT9 176 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 CORO6Q6QEF8 472 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 FBXW12Q6X9E4 464 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 MSANTD1Q6ZTZ1 278 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 PGAP1Q75T13 922 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 SYT9Q86SS6 491 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 TSPYL5Q86VY4 417 aaPredicted RBP5.61□□□□□ -1.51
HDAC1-204ENST00000471488 TMEM219Q86XT9 240 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 FAM90A1Q86YD7 464 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 GPR32P1Q8NGA4 272 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 OR5T2Q8NGG2 359 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 C8orf46Q8TAG6 207 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 FNDC8Q8TC99 324 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 DNAH3Q8TD57 4116 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 NMD3Q96D46 503 aaKnown RBP5.61□□□□□ -1.51
HDAC1-204ENST00000471488 DDOQ99489 341 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 SEPHS2Q99611 448 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 EVA1AQ9H8M9 152 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 CCDC167Q9P0B6 97 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 VAPAQ9P0L0 249 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 GRHPRQ9UBQ7 328 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 CORO2BQ9UQ03 480 aa5.61□□□□□ -1.51
HDAC1-204ENST00000471488 TCRBV4S1A1TA0A5B7 111 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 BIRC5O15392 142 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 TYROBPO43914 113 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 FCN3O75636 299 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 TFF1P04155 84 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 SELLP14151 372 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 COX7A1P24310 79 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 CD200P41217 278 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms