RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 SPATA24Q86W54 205 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 C1orf87Q8N0U7 546 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 MUC20Q8N307 709 aaPredicted RBP12.6□□□□□ -0.39
HOXB3-206ENST00000471459 BHLHE23Q8NDY6 225 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 OR51L1Q8NGJ5 315 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 OR8D4Q8NGM9 314 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 OR9Q1Q8NGQ5 310 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 OR6K6Q8NGW6 343 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 SLCO4A1Q96BD0 722 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 ZNF799Q96GE5 643 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 FEVQ99581 238 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 SLC30A2Q9BRI3 323 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 COPS4Q9BT78 406 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 WDR76Q9H967 626 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 CENPMQ9NSP4 180 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 ARMC1Q9NVT9 282 aa12.6□□□□□ -0.39
HOXB3-206ENST00000471459 MRPL22Q9NWU5 206 aaKnown RBP12.6□□□□□ -0.39
HOXB3-206ENST00000471459 A0A0A6YYJ9 748 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 ARRDC5A6NEK1 342 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 DEAF1O75398 565 aaPredicted RBP12.59□□□□□ -0.39
HOXB3-206ENST00000471459 APOC1P02654 83 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 CPT2P23786 658 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 POU1F1P28069 291 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 MDH2P40926 338 aaKnown RBP12.59□□□□□ -0.39
HOXB3-206ENST00000471459 BTG1P62324 171 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 GK2Q14410 553 aaPredicted RBP12.59□□□□□ -0.39
HOXB3-206ENST00000471459 KRTAP27-1Q3LI81 207 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 TEX30Q5JUR7 227 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 ZNF362Q5T0B9 420 aaPredicted RBP12.59□□□□□ -0.39
HOXB3-206ENST00000471459 DCXRQ7Z4W1 244 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 LRRC28Q86X40 367 aaPredicted RBP12.59□□□□□ -0.39
HOXB3-206ENST00000471459 ADGRG5Q8IZF4 528 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 OR10AD1Q8NGE0 317 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 ZNF418Q8TF45 676 aaPredicted RBP12.59□□□□□ -0.39
HOXB3-206ENST00000471459 CANT1Q8WVQ1 401 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 MAP6Q96JE9 813 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 MEGF10Q96KG7 1140 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 DDOQ99489 341 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 RBM4Q9BWF3 364 aaKnown RBP12.59□□□□□ -0.39
HOXB3-206ENST00000471459 GCM1Q9NP62 436 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 CMC2Q9NRP2 79 aa12.59□□□□□ -0.39
HOXB3-206ENST00000471459 PDP1Q9P0J1 537 aaPredicted RBP12.59□□□□□ -0.39
HOXB3-206ENST00000471459 GGT3PA6NGU5 568 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 TMEM178BH3BS89 294 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 DNAJC8O75937 253 aaPredicted RBP12.58□□□□□ -0.4
HOXB3-206ENST00000471459 IGHV2-70P01814 119 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 HMGN1P05114 100 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 GYPBP06028 91 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 ANXA8P13928 327 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 SPI1P17947 270 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 GRK5P34947 590 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 ERFP50548 548 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 RASSF2P50749 326 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 LCN2P80188 198 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 MZT1Q08AG7 82 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 DBPQ10586 325 aaPredicted RBP12.58□□□□□ -0.4
HOXB3-206ENST00000471459 SPRNQ5BIV9 151 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 SHFQ7M4L6 423 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 NAA40Q86UY6 237 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 PHC2Q8IXK0 858 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 ZNF511Q8NB15 262 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 OR11L1Q8NGX0 322 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 OR4Q3Q8NH05 313 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 NANPQ8TBE9 248 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 ERGIC1Q969X5 290 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 SLAMF6Q96DU3 332 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 PLEKHA8Q96JA3 519 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 KCNJ15Q99712 375 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 NIPSNAP1Q9BPW8 284 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 OPA3Q9H6K4 179 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 C7orf69Q9H7B7 122 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 PATZ1Q9HBE1 687 aaKnown RBP12.58□□□□□ -0.4
HOXB3-206ENST00000471459 PNRC2Q9NPJ4 139 aaKnown RBP12.58□□□□□ -0.4
HOXB3-206ENST00000471459 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.4
HOXB3-206ENST00000471459 VNN3Q9NY84 501 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 N6AMT1Q9Y5N5 214 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 COMMD3-BMI1R4GMX3 469 aa12.58□□□□□ -0.4
HOXB3-206ENST00000471459 MXRA5Q9NR99 2828 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 FBN1P35555 2871 aaKnown RBP12.57□□□□□ -0.4
HOXB3-206ENST00000471459 PPIAL4EA0A075B759 164 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 PPIAL4CA0A0B4J2A2 164 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 ZNF878C9JN71 531 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 PPIAL4DF5H284 164 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 F5H5P2 479 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 PPIAL4FP0DN26 164 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 HSD11B1P28845 292 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 PRKXP51817 358 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 GRB2P62993 217 aaKnown RBP12.57□□□□□ -0.4
HOXB3-206ENST00000471459 OR8G1Q15617 311 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 ESCO2Q56NI9 601 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 CELF2-AS1Q8N7Q2 184 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 SPERTQ8NA61 448 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 INTS14Q96SY0 518 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 REPIN1Q9BWE0 567 aaKnown RBP12.57□□□□□ -0.4
HOXB3-206ENST00000471459 NMNAT2Q9BZQ4 307 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 TOR3AQ9H497 397 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 G6PC2Q9NQR9 355 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 DNAJB9Q9UBS3 223 aa12.57□□□□□ -0.4
HOXB3-206ENST00000471459 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.56□□□□□ -0.4
HOXB3-206ENST00000471459 CD300LBA8K4G0 201 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms