RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 FUNDC2Q9BWH2 189 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 HDHD5Q9BXW7 423 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 COMMD4Q9H0A8 199 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 HDHD2Q9H0R4 259 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 RBM38Q9H0Z9 239 aaKnown RBP5.81□□□□□ -1.48
VAMP3-202ENST00000470357 PIGMQ9H3S5 423 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 MOB1AQ9H8S9 216 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 SP140LQ9H930 580 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 GALNT8Q9NY28 637 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 ASH2LQ9UBL3 628 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 ENPP5Q9UJA9 477 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 FBXL3Q9UKT7 428 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 CLEC4AQ9UMR7 237 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 STUB1Q9UNE7 303 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 SSR3Q9UNL2 185 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 PROCRQ9UNN8 238 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 COPS3Q9UNS2 423 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 GSTK1Q9Y2Q3 226 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 TIMM10BQ9Y5J6 103 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 FBN3Q75N90 2809 aa5.81□□□□□ -1.48
VAMP3-202ENST00000470357 TRBV2A0A0J9YWF9 115 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 TMEM212A6NML5 194 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 H3BSA7 217 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 PLPP2O43688 288 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 AIREO43918 545 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 UBL3O95164 117 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 MPZL1O95297 269 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ADRA2AP08913 450 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 CELP19835 753 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 EDNRAP25101 427 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 CTSSP25774 331 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 HSD11B1P28845 292 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 HOXC12P31275 282 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 CEACAM8P31997 349 aaPredicted RBP5.8□□□□□ -1.48
VAMP3-202ENST00000470357 CDAP32320 146 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ARR3P36575 388 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 LIPAP38571 399 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ECI1P42126 302 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 CCR9P51686 369 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 OR12D2P58182 307 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 HIST1H3AP68431 136 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ARF1P84077 181 aaKnown RBP5.8□□□□□ -1.48
VAMP3-202ENST00000470357 FAPQ12884 760 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ENDOGQ14249 297 aaKnown RBP5.8□□□□□ -1.48
VAMP3-202ENST00000470357 P2RY6Q15077 328 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 CDK5R1Q15078 307 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 RAB35Q15286 201 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 MEP1BQ16820 701 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 PHYHD1Q5SRE7 291 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 HIST2H3PS2Q5TEC6 136 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 LIPNQ5VXI9 398 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 LIPKQ5VXJ0 399 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 OR7E24Q6IFN5 339 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 TMEM53Q6P2H8 277 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 PAMR1Q6UXH9 720 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 TFAP2EQ6VUC0 442 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 HIST2H3AQ71DI3 136 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 SSX8Q7RTT4 187 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 SSX6Q7RTT6 188 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 SLC16A14Q7RTX9 510 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 NUFIP2Q7Z417 695 aaKnown RBP5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.8□□□□□ -1.48
VAMP3-202ENST00000470357 WDFY1Q8IWB7 410 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 C17orf78Q8N4C9 275 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 SLC22A24Q8N4F4 322 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 C9orf106Q8NAJ2 232 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 KBTBD8Q8NFY9 601 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ST7LQ8TDW4 575 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ITFG2Q969R8 447 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 SPTSSAQ969W0 71 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 NABP1Q96AH0 204 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 TMIGD2Q96BF3 282 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ISOC1Q96CN7 298 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 SLAMF6Q96DU3 332 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 SMIM19Q96E16 107 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 BOD1Q96IK1 185 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 FOXN4Q96NZ1 517 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 DOK1Q99704 481 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ZNF416Q9BWM5 594 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 CNTD2Q9H8S5 307 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ISG20L2Q9H9L3 353 aaKnown RBP5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ELOVL3Q9HB03 270 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 EMC7Q9NPA0 242 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 OBP2BQ9NPH6 170 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 PLSCR4Q9NRQ2 329 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 CENPMQ9NSP4 180 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 DDX28Q9NUL7 540 aaKnown RBP5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ACOXLQ9NUZ1 547 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 ZNF629Q9UEG4 869 aaPredicted RBP5.8□□□□□ -1.48
VAMP3-202ENST00000470357 MRM2Q9UI43 246 aaKnown RBP5.8□□□□□ -1.48
VAMP3-202ENST00000470357 FAM215AQ9Y5M1 114 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 LHFPL6Q9Y693 200 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 CEPT1Q9Y6K0 416 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 PCNX1Q96RV3 2341 aa5.8□□□□□ -1.48
VAMP3-202ENST00000470357 NAV3Q8IVL0 2385 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 TRDV1A0A1B0GX56 115 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 CIB4A0PJX0 185 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 OR6C6A6NF89 314 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 E9PLN8 166 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 LOC110117498-PIK3R3F6TDL0 507 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms