RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PPP1CAP62136 330 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 DUSP2Q05923 314 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 C1QTNF12Q5T7M4 302 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 GPR155Q7Z3F1 870 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 BHLHE23Q8NDY6 225 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 APOBEC3DQ96AK3 386 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-213ENST00000469300 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 CNR1P21554 472 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 FCARP24071 287 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 PCK2Q16822 640 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 CTU2Q2VPK5 515 aaKnown RBP13.6□□□□□ -0.23
LIMS2-213ENST00000469300 SOWAHCQ53LP3 525 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-213ENST00000469300 TMEM211Q6ICI0 200 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 USP51Q70EK9 711 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 SMAP2Q8WU79 429 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-213ENST00000469300 SECTM1Q8WVN6 248 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 ROBO4Q8WZ75 1007 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 CORO6Q6QEF8 472 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 LYPD4Q6UWN0 246 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 TGIF2Q9GZN2 237 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 METTL17Q9H7H0 456 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-213ENST00000469300 GPR173Q9NS66 373 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 PLA2G3Q9NZ20 509 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 SH2D1BO14796 132 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 TFAP2EQ6VUC0 442 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 WFDC8Q8IUA0 241 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 H1FXQ92522 213 aaKnown RBP13.59□□□□□ -0.23
LIMS2-213ENST00000469300 TAAR8Q969N4 342 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 SLC6A13Q9NSD5 602 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 TAS2R4Q9NYW5 299 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 EXO1Q9UQ84 846 aaKnown RBP13.59□□□□□ -0.23
LIMS2-213ENST00000469300 A0A0D9SG52 128 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 HOXB5P09067 269 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 APEX1P27695 318 aaKnown RBP13.59□□□□□ -0.23
LIMS2-213ENST00000469300 ZNF321PQ8N8H1 164 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 OR10K1Q8NGX5 313 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 OR51F2Q8NH61 342 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 ST7LQ8TDW4 575 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 PAQR8Q8TEZ7 354 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 KTI12Q96EK9 354 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-213ENST00000469300 C12orf57Q99622 126 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 RGPD3A6NKT7 1758 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-213ENST00000469300 GSTP1P09211 210 aaKnown RBP13.59□□□□□ -0.23
LIMS2-213ENST00000469300 C12orf73Q69YU5 71 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 DEGS2Q6QHC5 323 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 ANGPTL6Q8NI99 470 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 POC1BQ8TC44 478 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 PP6455Q8WZ26 134 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 PBOV1Q9GZY1 135 aa13.59□□□□□ -0.23
LIMS2-213ENST00000469300 CGGBP1Q9UFW8 167 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-213ENST00000469300 A0A096LPE4 126 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 IGHV5-10-1A0A0J9YXX1 117 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 A0A1W2PPZ6 126 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 GABARAPH6UMI1 98 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 PCBP3P57721 371 aaKnown RBP13.58□□□□□ -0.24
LIMS2-213ENST00000469300 ACSM1Q08AH1 577 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 BCL2A1Q16548 175 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 CD300LDQ6UXZ3 194 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 FBXW12Q6X9E4 464 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 TMEM179BQ7Z7N9 219 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 ZNF546Q86UE3 836 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 DMBX1Q8NFW5 382 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 OR2G2Q8NGZ5 317 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 PCNPQ8WW12 178 aaKnown RBP13.58□□□□□ -0.24
LIMS2-213ENST00000469300 APOBEC4Q8WW27 367 aaKnown RBP13.58□□□□□ -0.24
LIMS2-213ENST00000469300 RIMS4Q9H426 269 aaPredicted RBP13.58□□□□□ -0.24
LIMS2-213ENST00000469300 SIRT3Q9NTG7 399 aaPredicted RBP13.58□□□□□ -0.24
LIMS2-213ENST00000469300 A0A1W2PPV9 198 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 AIPO00170 330 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 C1QBP02746 253 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 TIAL1Q01085 375 aaKnown RBP eCLIP13.58□□□□□ -0.24
LIMS2-213ENST00000469300 HYAL4Q2M3T9 481 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 OR4Q3Q8NH05 313 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 GNRHR2Q96P88 292 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 TMEM100Q9NV29 134 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 OCIAD1Q9NX40 245 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.24
LIMS2-213ENST00000469300 ARID1AO14497 2285 aa13.58□□□□□ -0.24
LIMS2-213ENST00000469300 B4GALT1P15291 398 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 TGFBR1P36897 503 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 RPS19P39019 145 aaKnown RBP13.57□□□□□ -0.24
LIMS2-213ENST00000469300 UCNP55089 124 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 HMGN3Q15651 99 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 ZDHHC23Q8IYP9 409 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 REEP6Q96HR9 211 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 RAB33BQ9H082 229 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 GLRX2Q9NS18 164 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 IGHV3-15A0A0B4J1V0 119 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 BHLHE40O14503 412 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 GP1BAP07359 652 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 CLEC2LP0C7M8 214 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 HOXB3P14651 431 aaPredicted RBP13.57□□□□□ -0.24
LIMS2-213ENST00000469300 GABRA1P14867 456 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 BAK1Q16611 211 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 ANKRD9Q96BM1 317 aaPredicted RBP13.57□□□□□ -0.24
LIMS2-213ENST00000469300 RHNO1Q9BSD3 238 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 PLEKHF2Q9H8W4 249 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 SMCO4Q9NRQ5 59 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 ZNF816-ZNF321PA0A0X1KG74 233 aa13.57□□□□□ -0.24
LIMS2-213ENST00000469300 ZC3H12DA2A288 527 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms