RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 TMEM212A6NML5 194 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 DOK2O60496 412 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 ZFPL1O95159 310 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 TTRP02766 147 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 CD37P11049 281 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 EPXP11678 715 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 CD36P16671 472 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 CELP19835 753 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 GNLYP22749 145 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 UQCRFS1P47985 274 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 SORDQ00796 357 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 HGFACQ04756 655 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 MFGE8Q08431 387 aaPredicted RBP7.08□□□□□ -1.28
NPHP3-204ENST00000469232 IGFBP7Q16270 282 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 TSTQ16762 297 aaKnown RBP7.08□□□□□ -1.28
NPHP3-204ENST00000469232 GSG1Q2KHT4 349 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 WDR38Q5JTN6 314 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 C9orf135Q5VTT2 229 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 LIPKQ5VXJ0 399 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 XKRXQ6PP77 449 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 TMEM91Q6ZNR0 172 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 MDP1Q86V88 176 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 ALDH16A1Q8IZ83 802 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF808Q8N4W9 903 aaPredicted RBP7.08□□□□□ -1.28
NPHP3-204ENST00000469232 CCDC54Q8NEL0 328 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 AKR7LQ8NHP1 331 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 PHYHIPQ92561 330 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 GHSRQ92847 366 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 RNASE6Q93091 150 aaKnown RBP7.08□□□□□ -1.28
NPHP3-204ENST00000469232 SPSB4Q96A44 273 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 CENPMQ9NSP4 180 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 OR52A1Q9UKL2 312 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF281Q9Y2X9 895 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF462Q96JM2 2506 aa7.08□□□□□ -1.28
NPHP3-204ENST00000469232 FAM208BQ5VWN6 2430 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 RTTNQ86VV8 2226 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 TRBV5-7A0A0A0MS05 114 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 TMEM269A0A1B0GVZ9 245 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 LOC390937A0A1W2PQ73 354 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 LOC110117498-PIK3R3F6TDL0 507 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 C16orf97H3BN30 126 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 H3BSA7 217 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 M0R135 149 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 PSMD9O00233 223 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 LRRTM2O43300 516 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 GPX5O75715 221 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 RAD51DO75771 328 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 HLA-DPB1P04440 258 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF35P13682 527 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 ACHEP22303 614 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 ANOS1P23352 680 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 PCSK6P29122 969 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 PSMB10P40306 273 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 GDI2P50395 445 aaKnown RBP7.07□□□□□ -1.28
NPHP3-204ENST00000469232 TPTEP56180 551 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF121P58317 390 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-204ENST00000469232 UBE2NP61088 152 aaKnown RBP7.07□□□□□ -1.28
NPHP3-204ENST00000469232 FAM27E3Q08E93 113 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 TIMM50Q3ZCQ8 353 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 YIF1BQ5BJH7 314 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF704Q6ZNC4 412 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-204ENST00000469232 C1orf229Q6ZS94 237 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-204ENST00000469232 LUZP2Q86TE4 346 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 OR52H1Q8NGJ2 320 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 RAB2BQ8WUD1 216 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 ITLN2Q8WWU7 325 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-204ENST00000469232 SPTSSAQ969W0 71 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 S100PBPQ96BU1 408 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 DGCR14Q96DF8 476 aaKnown RBP7.07□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF799Q96GE5 643 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 DACH2Q96NX9 599 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 TTTY10Q9BZA0 68 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 SP140LQ9H930 580 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 TBCCD1Q9NVR7 557 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF319Q9P2F9 582 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 SH3BGRL2Q9UJC5 107 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF391Q9UJN7 358 aa7.07□□□□□ -1.28
NPHP3-204ENST00000469232 TRBV2A0A0J9YWF9 115 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 CLEC18AA5D8T8 446 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 DHRS7CA6NNS2 312 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 EEF1E1-BLOC1S5C9J1V9 151 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 EEF1E1O43324 174 aaKnown RBP7.06□□□□□ -1.28
NPHP3-204ENST00000469232 GATBO75879 557 aaKnown RBP7.06□□□□□ -1.28
NPHP3-204ENST00000469232 PRB1P04280 392 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 THBDP07204 575 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 DBHP09172 617 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 UBCP0CG48 685 aaKnown RBP7.06□□□□□ -1.28
NPHP3-204ENST00000469232 HSMCR30P0CW71 290 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 TUBG1P23258 451 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 IL32P24001 234 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 GADD45AP24522 165 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 STOMP27105 288 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 HTR5AP47898 357 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 CX3CR1P49238 355 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 RPS25P62851 125 aaKnown RBP7.06□□□□□ -1.28
NPHP3-204ENST00000469232 PLP2Q04941 152 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 TNP2Q05952 138 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 CDSNQ15517 529 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 TSC22D1Q15714 1073 aa7.06□□□□□ -1.28
NPHP3-204ENST00000469232 TAB1Q15750 504 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms