RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 KNG1P01042 644 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 LCATP04180 440 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 H1F0P07305 194 aaKnown RBP10.18□□□□□ -0.78
HDAC3-204ENST00000469207 ACSM4P0C7M7 580 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 TROVE2P10155 538 aaKnown RBP eCLIP10.18□□□□□ -0.78
HDAC3-204ENST00000469207 COX4I1P13073 169 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 CA6P23280 308 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 PSMB10P40306 273 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 MDH1P40925 334 aaKnown RBP10.18□□□□□ -0.78
HDAC3-204ENST00000469207 RPS27P42677 84 aaKnown RBP10.18□□□□□ -0.78
HDAC3-204ENST00000469207 RAG2P55895 527 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 ELF3P78545 371 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-204ENST00000469207 COX10Q12887 443 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 KRTAP27-1Q3LI81 207 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 DPY19L2P2Q6ZN68 376 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 DCDC5Q6ZRR9 648 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 RHOUQ7L0Q8 258 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 NLRC3Q7RTR2 1065 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 PDZD9Q8IXQ8 264 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 FGFRL1Q8N441 504 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 FAM86B1Q8N7N1 296 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 OR4K13Q8NH42 304 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 WFDC12Q8WWY7 111 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 FAM162AQ96A26 154 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 TECTBQ96PL2 329 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 TBX15Q96SF7 602 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 GPX7Q96SL4 187 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-204ENST00000469207 PITX2Q99697 317 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 HCAR1Q9BXC0 346 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 MMADHCQ9H3L0 296 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-204ENST00000469207 SMURF1Q9HCE7 757 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 PNRC2Q9NPJ4 139 aaKnown RBP10.18□□□□□ -0.78
HDAC3-204ENST00000469207 ADA2Q9NZK5 511 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 NDUFAF4Q9P032 175 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 AURKCQ9UQB9 309 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 TMEM5Q9Y2B1 443 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 MMP24Q9Y5R2 645 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 TNFRSF13BO14836 293 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-204ENST00000469207 TXNDC12O95881 172 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 MELTFP08582 738 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 IRF2P14316 349 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 MMP9P14780 707 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 HIST1H1CP16403 213 aaKnown RBP10.17□□□□□ -0.78
HDAC3-204ENST00000469207 CFHR2P36980 270 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 GATA4P43694 442 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 RPS6KA3P51812 740 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 RAD23AP54725 363 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 PRB3Q04118 309 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-204ENST00000469207 GPR157Q5UAW9 335 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 OLFML2AQ68BL7 652 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 SLC18B1Q6NT16 456 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 C8orf82Q6P1X6 216 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-204ENST00000469207 ZNF826PQ6ZT77 177 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 C1orf87Q8N0U7 546 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 SLC26A10Q8NG04 563 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 RP9Q8TA86 221 aaKnown RBP10.17□□□□□ -0.78
HDAC3-204ENST00000469207 ZNRF4Q8WWF5 429 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 C7orf34Q96L11 122 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 CCT8L2Q96SF2 557 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 HDHD2Q9H0R4 259 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 BEX1Q9HBH7 125 aa10.17□□□□□ -0.78
HDAC3-204ENST00000469207 RPRD1BQ9NQG5 326 aaKnown RBP10.17□□□□□ -0.78
HDAC3-204ENST00000469207 A0A1W2PRQ8 180 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 OR6C68A6NDL8 312 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 ZNF879B4DU55 563 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 J3QW42 95 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 PHYHO14832 338 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 TOX4O94842 621 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 FSTL3O95633 263 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 CRYBA1P05813 215 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 PSKH1P11801 424 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 CPT2P23786 658 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 CRABP1P29762 137 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 GGT2P36268 569 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 CD200P41217 278 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 ARF6P62330 175 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 ZNF92Q03936 586 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 TRAP1Q12931 704 aaKnown RBP10.16□□□□□ -0.78
HDAC3-204ENST00000469207 DGCR6Q14129 220 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 OR8B8Q15620 311 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 RFX4Q33E94 735 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 SNAI3Q3KNW1 292 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 BRICD5Q6PL45 260 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 SMARCD3Q6STE5 483 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 LYPD4Q6UWN0 246 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 C17orf107Q6ZR85 190 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 PGAP1Q75T13 922 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 ADCK1Q86TW2 530 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 CYP4Z1Q86W10 505 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 OR2AE1Q8NHA4 323 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 Q8TCH9 128 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 SPRYD4Q8WW59 207 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-204ENST00000469207 LHX4Q969G2 390 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 MAP6Q96JE9 813 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 CITED1Q99966 193 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 FUZQ9BT04 418 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 OR52D1Q9H346 318 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 ANKRD19PQ9H560 264 aa10.16□□□□□ -0.78
HDAC3-204ENST00000469207 MRPL22Q9NWU5 206 aaKnown RBP10.16□□□□□ -0.78
HDAC3-204ENST00000469207 ATPIF1Q9UII2 106 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms