RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ACTL6AO96019 429 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 THBS1P07996 1170 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 CELA2AP08217 269 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 AGAP20933 346 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 OTX2P32243 289 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 CCR5P51681 352 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 CCL7P80098 99 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 GID4Q8IVV7 300 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 FAM24BQ8N5W8 94 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 SLC38A9Q8NBW4 561 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 OR4D9Q8NGE8 314 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 OR51S1Q8NGJ8 323 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 OR10R2Q8NGX6 335 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 TNFAIP8L1Q8WVP5 186 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 ARL11Q969Q4 196 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 KCNK15Q9H427 330 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 WDR76Q9H967 626 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 ELL3Q9HB65 397 aaPredicted RBP11.09□□□□□ -0.63
USP11-206ENST00000469080 NCDNQ9UBB6 729 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 DCDC2BA2VCK2 349 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 ZNF726A6NNF4 738 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 DCTN6O00399 190 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 AGPAT2O15120 278 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 LAMTOR5O43504 91 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 CPEP16870 476 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 FXYD6P3P58550 94 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 TRIM61Q5EBN2 209 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 TMEM201Q5SNT2 666 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 MOB3CQ70IA8 216 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 ZNF546Q86UE3 836 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 GTPBP8Q8N3Z3 284 aaPredicted RBP11.09□□□□□ -0.63
USP11-206ENST00000469080 C1orf216Q8TAB5 229 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 HAVCR2Q8TDQ0 301 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 LCORQ96JN0 433 aaPredicted RBP11.09□□□□□ -0.63
USP11-206ENST00000469080 VSTM2LQ96N03 204 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 TMEM208Q9BTX3 173 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 C20orf24Q9BUV8 137 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 SUSD2Q9UGT4 822 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 GDF2Q9UK05 429 aaPredicted RBP11.09□□□□□ -0.63
USP11-206ENST00000469080 RCE1Q9Y256 329 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 F5H5P2 479 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 DLEU1O43261 78 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 HEXAP06865 529 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 PSMB1P20618 241 aaKnown RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 NRG3P56975 720 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 DHODHQ02127 395 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 OR6K3Q8NGY3 331 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 ABHD4Q8TB40 342 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 ARHGAP9Q9BRR9 750 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 BARX1Q9HBU1 254 aaPredicted RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 CYSLTR2Q9NS75 346 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 RXFP3Q9NSD7 469 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 RARRES3Q9UL19 164 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 COL6A6A6NMZ7 2263 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 CEP295Q9C0D2 2601 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 TNFSF14O43557 240 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 TCF21O43680 179 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 NKX2-2O95096 273 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 SMIM10L1P0DMW3 83 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 RCC1P18754 421 aaPredicted RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 GALNSP34059 522 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 CDKN2AP42771 156 aaKnown RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 RPS10P46783 165 aaKnown RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 POU3F1Q03052 451 aaPredicted RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 MGAT2Q10469 447 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 THNSL2Q86YJ6 484 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 TMEM156Q8N614 296 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 PTPMT1Q8WUK0 201 aaPredicted RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 SMIM10Q96HG1 83 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 TMPRSS13Q9BYE2 586 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 DUSP15Q9H1R2 295 aaPredicted RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 NOX4Q9NPH5 578 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 UQCC1Q9NVA1 299 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 A6NNC1 897 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 OR2AT4A6NND4 320 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 F5H0A9 414 aaPredicted RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 NPIPB9F8W1W9 429 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 SNAPC5O75971 98 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 AHSA1O95433 338 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 IFNA17P01571 189 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 RAB5AP20339 215 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 IL11P20809 199 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 DIO1P49895 249 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 RPS18P62269 152 aaKnown RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 RPL18Q07020 188 aaKnown RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 ELAVL1Q15717 326 aaKnown RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 YOD1Q5VVQ6 348 aaPredicted RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 SLC22A10Q63ZE4 541 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 PWWP2BQ6NUJ5 590 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 FAM46BQ96A09 425 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 SCARF2Q96GP6 870 aaPredicted RBP11.08□□□□□ -0.64
USP11-206ENST00000469080 SPACA5Q96QH8 159 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 DEFB126Q9BYW3 111 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 ALKBH4Q9NXW9 302 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 SH3BGRL2Q9UJC5 107 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 DSPPQ9NZW4 1301 aa11.08□□□□□ -0.64
USP11-206ENST00000469080 A0A0B4J2E0 115 aa11.07□□□□□ -0.64
USP11-206ENST00000469080 A0A1B0GX12 115 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms