RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PRTN3P24158 256 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 NOS3P29474 1203 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 TRAP1Q12931 704 aaKnown RBP20.46■□□□□ 0.87
PTCH1-210ENST00000468211 ZNF181Q2M3W8 571 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 ZNF404Q494X3 552 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 PGBD2Q6P3X8 592 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 LYPD2Q6UXB3 125 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 ZNF620Q6ZNG0 422 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 C19orf18Q8NEA5 215 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 ZNRF4Q8WWF5 429 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 SLCO4A1Q96BD0 722 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 ZMYND19Q96E35 227 aaPredicted RBP20.46■□□□□ 0.87
PTCH1-210ENST00000468211 CDRT15Q96T59 188 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 EGLN3Q9H6Z9 239 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 PCDHGB1Q9Y5G3 927 aa20.46■□□□□ 0.87
PTCH1-210ENST00000468211 IGHV2-70DA0A0C4DH43 119 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 C5orf63A6NC05 138 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 HLA-DQA2P01906 255 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 LCATP04180 440 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 FABP3P05413 133 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 PSKH1P11801 424 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 PYCR1P32322 319 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 RPS27P42677 84 aaKnown RBP20.45■□□□□ 0.86
PTCH1-210ENST00000468211 GNB2P62879 340 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.45■□□□□ 0.86
PTCH1-210ENST00000468211 SLC36A3Q495N2 470 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 CLEC12AQ5QGZ9 265 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 LYPD4Q6UWN0 246 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 PGAM4Q8N0Y7 254 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 OR2AJ1Q8NGZ0 328 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 NEIL1Q96FI4 390 aaPredicted RBP20.45■□□□□ 0.86
PTCH1-210ENST00000468211 NSMCE2Q96MF7 247 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 DDOQ99489 341 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 CDADC1Q9BWV3 514 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 IL1RAPQ9NPH3 570 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 MIOXQ9UGB7 285 aa20.45■□□□□ 0.86
PTCH1-210ENST00000468211 IDH3BO43837 385 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 GATA4P43694 442 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 TSPAN31Q12999 210 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 ECH1Q13011 328 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 BAMBIQ13145 260 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 MPPED2Q15777 294 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 PRAMEF6Q5VXH4 476 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 PARP8Q8N3A8 854 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 CYB561A3Q8NBI2 242 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 GNPDA2Q8TDQ7 276 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 RAB40AQ8WXH6 277 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 TAF15Q92804 592 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTCH1-210ENST00000468211 MCUR1Q96AQ8 359 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 ARL8BQ9NVJ2 186 aa20.44■□□□□ 0.86
PTCH1-210ENST00000468211 LRRC30A6NM36 301 aa20.43■□□□□ 0.86
PTCH1-210ENST00000468211 FAM20BO75063 409 aa20.43■□□□□ 0.86
PTCH1-210ENST00000468211 RAD23AP54725 363 aa20.43■□□□□ 0.86
PTCH1-210ENST00000468211 SAMD4BQ5PRF9 694 aaKnown RBP20.43■□□□□ 0.86
PTCH1-210ENST00000468211 ZNF362Q5T0B9 420 aaPredicted RBP20.43■□□□□ 0.86
PTCH1-210ENST00000468211 ZDHHC21Q8IVQ6 265 aa20.43■□□□□ 0.86
PTCH1-210ENST00000468211 OR9Q2Q8NGE9 314 aa20.43■□□□□ 0.86
PTCH1-210ENST00000468211 SGMS2Q8NHU3 365 aa20.43■□□□□ 0.86
PTCH1-210ENST00000468211 UPRTQ96BW1 309 aa20.43■□□□□ 0.86
PTCH1-210ENST00000468211 MS4A7Q9GZW8 240 aaPredicted RBP20.43■□□□□ 0.86
PTCH1-210ENST00000468211 UFSP2Q9NUQ7 469 aa20.43■□□□□ 0.86
PTCH1-210ENST00000468211 TMCC3Q9ULS5 477 aa20.43■□□□□ 0.86
PTCH1-210ENST00000468211 TVP23AA6NH52 213 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 BHLHE40O14503 412 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 FSTL3O95633 263 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 CPT2P23786 658 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 IFNGR2P38484 337 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 SNAI3Q3KNW1 292 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 BTNL3Q6UXE8 466 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 LRRN1Q6UXK5 716 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 PGAP1Q75T13 922 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 BTBD10Q9BSF8 475 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 ZNF747Q9BV97 191 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 MEGF8Q7Z7M0 2845 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 TRRAPQ9Y4A5 3859 aa20.42■□□□□ 0.86
PTCH1-210ENST00000468211 KIR2DS1A0A191URI9 304 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 M0R135 149 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 PLATP00750 562 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 PPIAL4GP0DN37 164 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 CA6P23280 308 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 CD200P41217 278 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 PITPNBP48739 271 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 TPTEP56180 551 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 ZNF92Q03936 586 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 FOXL1Q12952 345 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 MALLQ13021 153 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 SLC9A3R2Q15599 337 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 ZNF841Q6ZN19 808 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 C1orf87Q8N0U7 546 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 CELF2-AS1Q8N7Q2 184 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 OR8B3Q8NGG8 313 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 OR51L1Q8NGJ5 315 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 OR8D4Q8NGM9 314 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 OR2AE1Q8NHA4 323 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 Q8TCH9 128 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 ZNF799Q96GE5 643 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 PLEKHA8Q96JA3 519 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 OR8B2Q96RD0 313 aa20.41■□□□□ 0.86
PTCH1-210ENST00000468211 NSRP1Q9H0G5 558 aaKnown RBP20.41■□□□□ 0.86
PTCH1-210ENST00000468211 LYVE1Q9Y5Y7 322 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms