RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 MT-ND5P03915 603 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 LCKP06239 509 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF19P17023 458 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 OR12D2P58182 307 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 PPP1CBP62140 327 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 KCTD21Q4G0X4 260 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF544Q6NX49 715 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 PRSS45Q7RTY3 260 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 PRSS48Q7RTY5 328 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 NAA40Q86UY6 237 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 TMEM200AQ86VY9 491 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 AKAP1Q92667 903 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNIP1-202ENST00000468040 CCDC90BQ9GZT6 254 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 ACOXLQ9NUZ1 547 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 FAM206AQ9NX38 181 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 CISD1Q9NZ45 108 aaKnown RBP13.11□□□□□ -0.31
SNIP1-202ENST00000468040 ERVK-18Q9QC07 812 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 HEATR1Q9H583 2144 aaKnown RBP13.1□□□□□ -0.31
SNIP1-202ENST00000468040 E7EQL1 145 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 LOC110117498-PIK3R3F6TDL0 507 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 HS3ST1O14792 307 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 RPP14O95059 124 aaKnown RBP13.1□□□□□ -0.31
SNIP1-202ENST00000468040 ADRA2AP08913 450 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 SLC2A1P11166 492 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 CHN2P52757 468 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 MALLQ13021 153 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 RGS7BPQ6MZT1 257 aaPredicted RBP13.1□□□□□ -0.31
SNIP1-202ENST00000468040 VHLLQ6RSH7 139 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 FAM57BQ71RH2 274 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 LILRB1Q8NHL6 650 aaPredicted RBP13.1□□□□□ -0.31
SNIP1-202ENST00000468040 TMEM171Q8WVE6 324 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 SGCDQ92629 289 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 RORBQ92753 470 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 FBXW5Q969U6 566 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 PELI1Q96FA3 418 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 PGAM5Q96HS1 289 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 SIGLEC11Q96RL6 698 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 DHRS9Q9BPW9 319 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 MND1Q9BWT6 205 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 OR10A2Q9H208 303 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 RGCCQ9H4X1 137 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 ISG20L2Q9H9L3 353 aaKnown RBP13.1□□□□□ -0.31
SNIP1-202ENST00000468040 BRD7Q9NPI1 651 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 CLEC2DQ9UHP7 191 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 SNX5Q9Y5X3 404 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 PKDREJQ9NTG1 2253 aa13.1□□□□□ -0.31
SNIP1-202ENST00000468040 TBX1O43435 398 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 XRCC2O43543 280 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 GPRIN2O60269 458 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 SRSF10O75494 262 aaKnown RBP13.09□□□□□ -0.31
SNIP1-202ENST00000468040 TNFAIP8O95379 198 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 PNPP00491 289 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 THBS4P35443 961 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 GBX2P52951 348 aaPredicted RBP13.09□□□□□ -0.31
SNIP1-202ENST00000468040 MFGE8Q08431 387 aaPredicted RBP13.09□□□□□ -0.31
SNIP1-202ENST00000468040 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF718Q3SXZ3 478 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 BCL2L15Q5TBC7 163 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 OR2G6Q5TZ20 316 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF787Q6DD87 383 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 FDX2Q6P4F2 183 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 NANOGP1Q8N7R0 232 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 SPRYD4Q8WW59 207 aaPredicted RBP13.09□□□□□ -0.31
SNIP1-202ENST00000468040 NEUROG1Q92886 237 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 OPA3Q9H6K4 179 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 FAIMQ9NVQ4 179 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 NUFIP1Q9UHK0 495 aaKnown RBP13.09□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF391Q9UJN7 358 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 GTF2A1LQ9UNN4 478 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 STARD10Q9Y365 291 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 CMAHPQ9Y471 501 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 N6AMT1Q9Y5N5 214 aa13.09□□□□□ -0.31
SNIP1-202ENST00000468040 CADP27708 2225 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 A0A1W2PPR1 153 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 ATE1O95260 518 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 MT-ND2P03891 347 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 HTR1AP08908 422 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 CFL1P23528 166 aaKnown RBP13.08□□□□□ -0.32
SNIP1-202ENST00000468040 GCH1P30793 250 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 APOBEC3AP31941 199 aaPredicted RBP13.08□□□□□ -0.32
SNIP1-202ENST00000468040 TGM4P49221 684 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 FABP6P51161 128 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 WNT4P56705 351 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 SELENOVP59797 346 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 ERVS71-1P61550 626 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 IRF3Q14653 427 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 ADIPOQQ15848 244 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 TIGD6Q17RP2 521 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 CCDC58Q4VC31 144 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 MBNL2Q5VZF2 373 aaKnown RBP13.08□□□□□ -0.32
SNIP1-202ENST00000468040 HIST2H2BCQ6DN03 193 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 SVOPQ8N4V2 548 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 ZNF611Q8N823 705 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 OR8B12Q8NGG6 310 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 MARS2Q96GW9 593 aaKnown RBP13.08□□□□□ -0.32
SNIP1-202ENST00000468040 NR1H4Q96RI1 486 aaPredicted RBP13.08□□□□□ -0.32
SNIP1-202ENST00000468040 OR2J1Q9GZK6 312 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 PBOV1Q9GZY1 135 aa13.08□□□□□ -0.32
SNIP1-202ENST00000468040 TRIM36Q9NQ86 728 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms