RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SPTSSAQ969W0 71 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 OR2V2Q96R30 315 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 TBC1D23Q9NUY8 699 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 PCDHB10Q9UN67 800 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 WNK2Q9Y3S1 2297 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 IQCF6A8MYZ5 107 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 F5H5K5 113 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 TIPRLO75663 272 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 SBK2P0C263 348 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 SRP9P49458 86 aaKnown RBP16.1■□□□□ 0.17
COL7A1-207ENST00000467985 TPTEP56180 551 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 BTG1P62324 171 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 MICAQ29983 383 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 CYB561A3Q8NBI2 242 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 DDOQ99489 341 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 SLC30A2Q9BRI3 323 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 DGCR6LQ9BY27 220 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 PLA2G12AQ9BZM1 189 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 OCEL1Q9H607 264 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 MRPL22Q9NWU5 206 aaKnown RBP16.1■□□□□ 0.17
COL7A1-207ENST00000467985 SAMHD1Q9Y3Z3 626 aaKnown RBP16.1■□□□□ 0.17
COL7A1-207ENST00000467985 TENM1Q9UKZ4 2725 aa16.1■□□□□ 0.17
COL7A1-207ENST00000467985 PPIAL4EA0A075B759 164 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 PPIAL4CA0A0B4J2A2 164 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 PPIAL4DF5H284 164 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 E2F6O75461 281 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 FOXH1O75593 365 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 PPIAL4FP0DN26 164 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 FASP25445 335 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 LRRC28Q86X40 367 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-207ENST00000467985 MUC20Q8N307 709 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-207ENST00000467985 PAPD5Q8NDF8 572 aaKnown RBP16.09■□□□□ 0.17
COL7A1-207ENST00000467985 OR2T33Q8NG76 320 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 OR8D4Q8NGM9 314 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 SLCO4A1Q96BD0 722 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 DUS3LQ96G46 650 aaKnown RBP16.09■□□□□ 0.17
COL7A1-207ENST00000467985 TSSK6Q9BXA6 273 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 GCM1Q9NP62 436 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 PNRC2Q9NPJ4 139 aaKnown RBP16.09■□□□□ 0.17
COL7A1-207ENST00000467985 TMEM100Q9NV29 134 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 ARMC1Q9NVT9 282 aa16.09■□□□□ 0.17
COL7A1-207ENST00000467985 A0A1B0GWJ7 208 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 LRRC30A6NM36 301 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 IFNGP01579 166 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 LCATP04180 440 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 CPT2P23786 658 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 PYCR1P32322 319 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 MDH2P40926 338 aaKnown RBP16.08■□□□□ 0.16
COL7A1-207ENST00000467985 SRSF2Q01130 221 aaKnown RBP16.08■□□□□ 0.16
COL7A1-207ENST00000467985 ZMYND11Q15326 602 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 ZNF362Q5T0B9 420 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-207ENST00000467985 C1QL2Q7Z5L3 287 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 SLC37A3Q8NCC5 494 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 OR10AD1Q8NGE0 317 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 ZNF418Q8TF45 676 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-207ENST00000467985 MAP6Q96JE9 813 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 MEGF10Q96KG7 1140 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 SIGLEC11Q96RL6 698 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 TMPRSS13Q9BYE2 586 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 DDX28Q9NUL7 540 aaKnown RBP16.08■□□□□ 0.16
COL7A1-207ENST00000467985 DCAF16Q9NXF7 216 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 U3KQV3 271 aa16.08■□□□□ 0.16
COL7A1-207ENST00000467985 LOC105371242A0A075B767 164 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 TMEM178BH3BS89 294 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 M0R135 149 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 FMO3P31513 532 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 MMP16P51512 607 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 BLVRAP53004 296 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 SLC25A1P53007 311 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 ELF3P78545 371 aaPredicted RBP16.07■□□□□ 0.16
COL7A1-207ENST00000467985 LCN2P80188 198 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 DBPQ10586 325 aaPredicted RBP16.07■□□□□ 0.16
COL7A1-207ENST00000467985 PPP1R8Q12972 351 aaKnown RBP16.07■□□□□ 0.16
COL7A1-207ENST00000467985 GK2Q14410 553 aaPredicted RBP16.07■□□□□ 0.16
COL7A1-207ENST00000467985 CD300LDQ6UXZ3 194 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 PGAP1Q75T13 922 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 BHLHE23Q8NDY6 225 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 NANPQ8TBE9 248 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 ZFAND2BQ8WV99 257 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 ZNF799Q96GE5 643 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 RBM4Q9BWF3 364 aaKnown RBP16.07■□□□□ 0.16
COL7A1-207ENST00000467985 C7orf69Q9H7B7 122 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 WDR76Q9H967 626 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 PATZ1Q9HBE1 687 aaKnown RBP16.07■□□□□ 0.16
COL7A1-207ENST00000467985 S100A14Q9HCY8 104 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 DNAJB9Q9UBS3 223 aa16.07■□□□□ 0.16
COL7A1-207ENST00000467985 NOP16Q9Y3C1 178 aaKnown RBP16.07■□□□□ 0.16
COL7A1-207ENST00000467985 TVP23AA6NH52 213 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 RIIAD1A6NNX1 92 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 BAG2O95816 211 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 AVPP01185 164 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 EPHA1P21709 976 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 ZNF181Q2M3W8 571 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 DRAM2Q6UX65 266 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 C1orf229Q6ZS94 237 aaPredicted RBP16.06■□□□□ 0.16
COL7A1-207ENST00000467985 USP43Q70EL4 1123 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 C1orf87Q8N0U7 546 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 CELF2-AS1Q8N7Q2 184 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 NMNAT2Q9BZQ4 307 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 VNN3Q9NY84 501 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms