RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MRPL55Q7Z7F7 128 aaKnown RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 UNC93AQ86WB7 457 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 HORMAD1Q86X24 394 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 CBLN2Q8IUK8 224 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TCAIMQ8N3R3 496 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 FAM86B1Q8N7N1 296 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 OR52E2Q8NGJ4 325 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 LILRB4Q8NHJ6 448 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 NDNFQ8TB73 568 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 ITFG1Q8TB96 612 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 LRRC20Q8TCA0 184 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 MCOLN3Q8TDD5 553 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TCP10LQ8TDR4 215 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 RPEQ96AT9 228 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 AURKBQ96GD4 344 aaPredicted RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SMIM10Q96HG1 83 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 ATP6V1G3Q96LB4 118 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 GLT1D1Q96MS3 346 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 COL21A1Q96P44 957 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TSSK3Q96PN8 268 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SPIN2AQ99865 258 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 FOXC2Q99958 501 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SPIN2BQ9BPZ2 258 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 CHID1Q9BWS9 393 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 CALN1Q9BXU9 219 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 PRRG3Q9BZD7 231 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TPK1Q9H3S4 243 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SYNDIG1Q9H7V2 258 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 UBE2ZQ9H832 354 aaPredicted RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 MRM3Q9HC36 420 aaKnown RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 WFDC1Q9HC57 220 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 CD209Q9NNX6 404 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 DMAP1Q9NPF5 467 aaPredicted RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC39A1Q9NY26 324 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 ZMAT5Q9UDW3 170 aaKnown RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 PCYOX1Q9UHG3 505 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TRAPPC4Q9Y296 219 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 HEBP2Q9Y5Z4 205 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 MRPS18BQ9Y676 258 aaKnown RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 ADGRA3Q8IWK6 1321 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 PDS5BQ9NTI5 1447 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 IGLV2-18A0A075B6J9 118 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 H3BN98 237 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 NME4O00746 187 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 POLR3GO15318 223 aaPredicted RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 NMT2O60551 498 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 RDH16O75452 317 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 PLEKHA8P1O95397 391 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 RAB3DO95716 219 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 HPRT1P00492 218 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 BGLAPP02818 100 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CATP04040 527 aaKnown RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 FABP3P05413 133 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 EIF4EP06730 217 aaKnown RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 TACSTD2P09758 323 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 ZDHHC11BP0C7U3 371 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 PNMA6AP0CW24 399 aaPredicted RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 GFAPP14136 432 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CRISP2P16562 243 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF14P17017 642 aaPredicted RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 RAB3BP20337 219 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 PRKACBP22694 351 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 IVDP26440 423 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 LCN1P31025 176 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CEACAM3P40198 252 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CSKP41240 450 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 GPR4P46093 362 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 SERPINB8P50452 374 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 FABP6P51161 128 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 RND2P52198 227 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 ATP5J2P56134 94 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 PSMC5P62195 406 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 TNNC1P63316 161 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 ART3Q13508 389 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 TFDP2Q14188 446 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 PON3Q15166 354 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 PSG5Q15238 335 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 QPRTQ15274 297 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 C5orf64Q2M2E5 130 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 C5orf47Q569G3 176 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 THEM4Q5T1C6 240 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 FRMPD2BQ6IN97 320 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 RWDD4Q6NW29 188 aaKnown RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 PRMT9Q6P2P2 845 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 TEX43Q6ZNM6 134 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 STRADAQ7RTN6 431 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 PID1Q7Z2X4 250 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 OR2W3Q7Z3T1 314 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 C6orf120Q7Z4R8 191 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CAMK2N1Q7Z7J9 78 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 RBM45Q8IUH3 476 aaKnown RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 FAM71AQ8IYT1 594 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 ST13P4Q8IZP2 240 aaPredicted RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 KIF2BQ8N4N8 673 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CBR4Q8N4T8 237 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 SNX31Q8N9S9 440 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CHST4Q8NCG5 386 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 NPBQ8NG41 125 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 OR10J6PQ8NGY7 276 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 OR4S2Q8NH73 311 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms