RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MARS2Q96GW9 593 aaKnown RBP13.76□□□□□ -0.21
GPC1-207ENST00000466624 TTTY10Q9BZA0 68 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 MOB1AQ9H8S9 216 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 STARD10Q9Y365 291 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 EXOSC1Q9Y3B2 195 aaKnown RBP13.76□□□□□ -0.21
GPC1-207ENST00000466624 TPRKBQ9Y3C4 175 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 IGLV3-9A0A075B6K5 115 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 PSMD9O00233 223 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 SRSF10O75494 262 aaKnown RBP13.75□□□□□ -0.21
GPC1-207ENST00000466624 TACSTD2P09758 323 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 OR4A8P0C604 315 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 LIMS3P0CW19 117 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 LIMS4P0CW20 117 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 SERPINF1P36955 418 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 ZNF121P58317 390 aaPredicted RBP13.75□□□□□ -0.21
GPC1-207ENST00000466624 ERVS71-1P61550 626 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 ZNF718Q3SXZ3 478 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 AGAP6Q5VW22 663 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 VHLLQ6RSH7 139 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 FBXW12Q6X9E4 464 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 AHSA2Q719I0 299 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 FAM220AQ7Z4H9 259 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 NAA40Q86UY6 237 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 MUC15Q8N387 334 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 SLC25A40Q8TBP6 338 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 HAVCR2Q8TDQ0 301 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 RHNO1Q9BSD3 238 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 ALG8Q9BVK2 526 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 OR51B6Q9H340 312 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 OPA3Q9H6K4 179 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 FAM206AQ9NX38 181 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 FBXO9Q9UK97 447 aaPredicted RBP13.75□□□□□ -0.21
GPC1-207ENST00000466624 BLOC1S6Q9UL45 172 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 EDARQ9UNE0 448 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 LRRC42Q9Y546 428 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 FBN2P35556 2912 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 CACNA1DQ01668 2161 aa13.75□□□□□ -0.21
GPC1-207ENST00000466624 TMEM269A0A1B0GVZ9 245 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 B9A039 149 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 XRCC2O43543 280 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 ANXA2P07355 339 aaKnown RBP13.74□□□□□ -0.21
GPC1-207ENST00000466624 MYL12AP19105 171 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 CRHBPP24387 322 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 GCH1P30793 250 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 KRTAP10-9P60411 292 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 SLC35A2P78381 396 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 MALLQ13021 153 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 MRPL28Q13084 256 aaKnown RBP13.74□□□□□ -0.21
GPC1-207ENST00000466624 MSMPQ1L6U9 139 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 LIPNQ5VXI9 398 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 RNLSQ5VYX0 342 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 PAMR1Q6UXH9 720 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 LHFPL3Q86UP9 236 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 STX19Q8N4C7 294 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 YIPF7Q8N8F6 280 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 SYNPRQ8TBG9 265 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 KLF14Q8TD94 323 aaPredicted RBP13.74□□□□□ -0.21
GPC1-207ENST00000466624 IGFBPL1Q8WX77 278 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 MYDGFQ969H8 173 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 TRAF4Q9BUZ4 470 aaPredicted RBP13.74□□□□□ -0.21
GPC1-207ENST00000466624 YTHDF1Q9BYJ9 559 aaKnown RBP13.74□□□□□ -0.21
GPC1-207ENST00000466624 OR2J1Q9GZK6 312 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 PLK3Q9H4B4 646 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 RGCCQ9H4X1 137 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 DUSP21Q9H596 190 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 CBLN4Q9NTU7 201 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 UBAP1Q9NZ09 502 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 ZNF391Q9UJN7 358 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 CAB39Q9Y376 341 aaPredicted RBP13.74□□□□□ -0.21
GPC1-207ENST00000466624 R4GMQ9 66 aa13.74□□□□□ -0.21
GPC1-207ENST00000466624 ARFGEF3Q5TH69 2177 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 APCP25054 2843 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 ABCA12Q86UK0 2595 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 MAGEB4O15481 346 aaPredicted RBP13.73□□□□□ -0.21
GPC1-207ENST00000466624 IGHV3-13P01766 116 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 CDK1P06493 297 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 SLC2A1P11166 492 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 RAC2P15153 192 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 KLF3P57682 345 aaPredicted RBP13.73□□□□□ -0.21
GPC1-207ENST00000466624 SELENOVP59797 346 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 SWI5Q1ZZU3 235 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 SNAI3Q3KNW1 292 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 TP53I3Q53FA7 332 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 C11orf71Q6IPW1 123 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 ZNF786Q8N393 782 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 ITFG2Q969R8 447 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 SPSB4Q96A44 273 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
GPC1-207ENST00000466624 OR10A2Q9H208 303 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 POFUT1Q9H488 388 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 CHCHD3Q9NX63 227 aaKnown RBP13.73□□□□□ -0.21
GPC1-207ENST00000466624 NUFIP1Q9UHK0 495 aaKnown RBP13.73□□□□□ -0.21
GPC1-207ENST00000466624 GNG8Q9UK08 70 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 PCDHGB5Q9Y5G0 923 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 SNX5Q9Y5X3 404 aa13.73□□□□□ -0.21
GPC1-207ENST00000466624 TMEM129A0AVI4 362 aa13.72□□□□□ -0.21
GPC1-207ENST00000466624 LOC110117498-PIK3R3F6TDL0 507 aa13.72□□□□□ -0.21
GPC1-207ENST00000466624 SOD3P08294 240 aa13.72□□□□□ -0.21
GPC1-207ENST00000466624 ADRA2AP08913 450 aa13.72□□□□□ -0.21
GPC1-207ENST00000466624 KITLGP21583 273 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms