RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 FAM166AQ6J272 317 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 SLC25A25Q6KCM7 469 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 CPNE4Q96A23 557 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-205ENST00000466192 FGGYQ96C11 551 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 SLC6A15Q9H2J7 730 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 TTLL8A6PVC2 850 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 CTAG2O75638 210 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 GLSO94925 669 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-205ENST00000466192 SLC2A1P11166 492 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 MEOX1P50221 254 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 DYRK1AQ13627 763 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 ANKRD16Q6P6B7 361 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 PLEKHA1Q9HB21 404 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 KLF13Q9Y2Y9 288 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-205ENST00000466192 CFAP47Q6ZTR5 3102 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 LOC100289279A0A1B0GTE1 492 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 XRCC3O43542 346 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 SYT7O43581 403 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 CYTIPO60759 359 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 ANOS1P23352 680 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 HTR2CP28335 458 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 CLDN18P56856 261 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 SOX8P57073 446 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 BTG1P62324 171 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 PLGLB1Q02325 96 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 LRRC18Q8N456 261 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 JAGN1Q8N5M9 183 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 ABHD3Q8WU67 409 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 C7orf50Q9BRJ6 194 aaKnown RBP16.09■□□□□ 0.17
COL9A3-205ENST00000466192 LRFN3Q9BTN0 628 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 NIPAL2Q9H841 368 aa16.09■□□□□ 0.17
COL9A3-205ENST00000466192 ZNF275Q9NSD4 429 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-205ENST00000466192 FREM1Q5H8C1 2179 aa16.08■□□□□ 0.17
COL9A3-205ENST00000466192 WT1P19544 449 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-205ENST00000466192 GNALP38405 381 aa16.08■□□□□ 0.16
COL9A3-205ENST00000466192 SRYQ05066 204 aa16.08■□□□□ 0.16
COL9A3-205ENST00000466192 BIVMQ86UB2 503 aa16.08■□□□□ 0.16
COL9A3-205ENST00000466192 MCUBQ9NWR8 336 aa16.08■□□□□ 0.16
COL9A3-205ENST00000466192 NUBP2Q9Y5Y2 271 aa16.08■□□□□ 0.16
COL9A3-205ENST00000466192 A0A0A6YYJ9 748 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 TMEM272A0A1B0GTI8 110 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 ACOT7O00154 380 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 GMDSO60547 372 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 KDM4BO94953 1096 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 ZNF84P51523 738 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 RRADP55042 308 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 ZNF121P58317 390 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-205ENST00000466192 MRPS10P82664 201 aaKnown RBP16.07■□□□□ 0.16
COL9A3-205ENST00000466192 PDSS1Q5T2R2 415 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 SFRP4Q6FHJ7 346 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-205ENST00000466192 AAED1Q7RTV5 226 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 OR51E1Q8TCB6 317 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 SLC25A28Q96A46 364 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 ZNF552Q9H707 407 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-205ENST00000466192 ZNF319Q9P2F9 582 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 GVINP1Q7Z2Y8 2422 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 MEGF11A6BM72 1044 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 GGT3PA6NGU5 568 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 KLRC4-KLRK1H3BQV0 150 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 TM4SF5O14894 197 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 ECDO95905 644 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-205ENST00000466192 DHFRP00374 187 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 ITGB2P05107 769 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 ZNF708P17019 499 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 MNDAP41218 407 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 CX3CR1P49238 355 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 RRAS2P62070 204 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-205ENST00000466192 GALK2Q01415 458 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 TMEM255AQ5JRV8 349 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 IGF2-ASQ6U949 168 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 PHF21AQ96BD5 680 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 ADAT3Q96EY9 351 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-205ENST00000466192 PRRX2Q99811 253 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 MOB1AQ9H8S9 216 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 CRLF2Q9HC73 371 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 HRASLSQ9HDD0 168 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 DIABLOQ9NR28 239 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 COPZ2Q9P299 210 aa16.07■□□□□ 0.16
COL9A3-205ENST00000466192 A0A1B0GTI1 187 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 CD46P15529 392 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 AP3S2P59780 193 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 HIST1H3AP68431 136 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 MRPS34P82930 218 aaKnown RBP16.06■□□□□ 0.16
COL9A3-205ENST00000466192 HYAL4Q2M3T9 481 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 HIST2H3PS2Q5TEC6 136 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 PLXDC2Q6UX71 529 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 HIST2H3AQ71DI3 136 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-205ENST00000466192 COMMD2Q86X83 199 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 GJC3Q8NFK1 279 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 OR8B12Q8NGG6 310 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 OR6M1Q8NGM8 313 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 OR1J2Q8NGS2 313 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 C15orf40Q8WUR7 153 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 GAL3ST1Q99999 423 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 ATG5Q9H1Y0 275 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 MYEF2Q9P2K5 600 aaKnown RBP16.06■□□□□ 0.16
COL9A3-205ENST00000466192 SLC5A6Q9Y289 635 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 CEP250Q9BV73 2442 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 CDK2AP1O14519 115 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms